Guide to the Human Genome
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Name: MYLIP Sequence: fasta or formatted (445aa) NCBI GI: 38788243
Description:

myosin regulatory light chain interacting protein

Referenced in:

Myosin
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         30           2
 C cysteine            4.5         20           2
 D aspartate           2.9         13           2
 E glutamate           7.6         34           3
 F phenylalanine       2.9         13           2
 G glycine             4.9         22           1
 H histidine           3.1         14           1
 I isoleucine          4.7         21           2
 K lysine              5.4         24           2
 L leucine            11.2         50           2
 M methionine          2.5         11           2
 N asparagine          4.7         21           2
 P proline             2.7         12           1
 Q glutamine           5.2         23           2
 R arginine            4.9         22           2
 S serine              9.0         40           2
 T threonine           4.9         22           1
 V valine              7.6         34           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin regulatory light chain interacting protein [H... 
PTPN4                 0.122   protein tyrosine phosphatase, non-receptor type 4 [Ho...
PTPN3                 0.120   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.120   protein tyrosine phosphatase, non-receptor type 3 i...
EPB41L5               0.117   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.115   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.115   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L2               0.115   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.115   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.115   erythrocyte membrane protein band 4.1-like 2 isoform ...
EPB41                 0.114   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.114   erythrocyte membrane protein band 4.1 (elliptocytosis...
EPB41L1               0.112   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.112   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L3               0.110   erythrocyte membrane protein band 4.1-like 3 
FRMD3                 0.110   FERM domain containing 3 
FARP1                 0.109   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
RDX                   0.109   radixin 
FRMD5                 0.108   FERM domain containing 5 isoform 2 
MSN                   0.106   moesin 
EZR                   0.104   ezrin 
EZR                   0.104   ezrin 
FARP2                 0.101   FERM, RhoGEF and pleckstrin domain protein 2 
FRMD7                 0.098   FERM domain containing 7 
EPB41L4A              0.096   erythrocyte protein band 4.1-like 4 
NF2                   0.094   neurofibromin 2 isoform 2 
NF2                   0.094   neurofibromin 2 isoform 2 
NF2                   0.094   neurofibromin 2 isoform 2 
NF2                   0.094   neurofibromin 2 isoform 1 
PTPN14                0.086   protein tyrosine phosphatase, non-receptor type 14 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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