Guide to the Human Genome
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Name: ANKRD36B Sequence: fasta or formatted (1121aa) NCBI GI: 124517695
Description:

ankyrin repeat domain 36B

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         66           2
 C cysteine            2.1         23           2
 D aspartate           6.0         67           2
 E glutamate           9.7        109           2
 F phenylalanine       1.2         13           1
 G glycine             3.7         42           3
 H histidine           1.8         20           1
 I isoleucine          5.3         59           2
 K lysine             12.8        144           3
 L leucine             8.7         97           3
 M methionine          2.0         22           2
 N asparagine          4.2         47           2
 P proline             2.1         23           2
 Q glutamine           8.0         90           3
 R arginine            5.4         60           2
 S serine              9.2        103           2
 T threonine           6.2         69           2
 V valine              4.8         54           1
 W tryptophan          0.2          2           1
 Y tyrosine            1.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 36B 
LOC400986             0.884   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36               0.858   PREDICTED: ankyrin repeat domain 36 
LOC400986             0.737   PREDICTED: protein immuno-reactive with anti-PTH po...
LOC730658             0.390   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
LOC100133923          0.273   PREDICTED: similar to UPF0634 protein C 
ANKRD36               0.272   PREDICTED: ankyrin repeat domain 36 
ANKRD26               0.252   ankyrin repeat domain 26 
ANKRD62               0.238   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.238   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
LOC100289777          0.236   PREDICTED: hypothetical protein XP_002348316 
ANKRD62               0.236   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
CCDC144A              0.163   coiled-coil domain containing 144A 
ANKRD30A              0.160   ankyrin repeat domain 30A 
ANKRD30B              0.138   ankyrin repeat domain 30B 
ANKRD20A5             0.104   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.104   PREDICTED: ankyrin repeat domain 20 family, member ...
LOC100133939          0.093   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD20A3             0.089   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.089   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.089   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.088   ankyrin repeat domain 20 family, member A4 
ANKRD18B              0.085   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.085   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.085   PREDICTED: ankyrin repeat domain 18B 
ANKRD18A              0.080   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.080   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.080   PREDICTED: ankyrin repeat domain 18A 
LOC100293353          0.047   PREDICTED: similar to Coiled-coil domain-containing...
LOC100287980          0.047   PREDICTED: similar to Coiled-coil domain-containing...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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