YTHDC1 35320

Name: YTHDC1	Sequence: fasta or formatted (727aa)		NCBI GI: 72534750
Description: splicing factor YT521-B isoform 1		Referenced in: RNA-binding Proteins Capping and Splicing
Other entries for this name: alt prot [709aa] splicing factor YT521-B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 26 2 C cysteine 0.7 5 1 D aspartate 8.1 59 2 E glutamate 13.5 98 20 F phenylalanine 2.2 16 2 G glycine 6.1 44 2 H histidine 3.3 24 2 I isoleucine 2.5 18 1 K lysine 6.6 48 3 L leucine 4.4 32 2 M methionine 1.4 10 1 N asparagine 3.4 25 2 P proline 6.3 46 4 Q glutamine 3.3 24 1 R arginine 12.5 91 3 S serine 10.5 76 3 T threonine 2.5 18 1 V valine 5.4 39 2 W tryptophan 0.7 5 1 Y tyrosine 3.2 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor YT521-B isoform 1 YTHDC1 0.970 splicing factor YT521-B isoform 2 YTHDC2 0.072 YTH domain containing 2 EIF5B 0.045 eukaryotic translation initiation factor 5B CDC2L2 0.044 cell division cycle 2-like 2 isoform 4 CDC2L2 0.044 cell division cycle 2-like 2 isoform 1 CDC2L1 0.044 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.044 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.044 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.044 cell division cycle 2-like 1 (PITSLRE proteins) isof... SFRS18 0.042 splicing factor, arginine/serine-rich 130 SFRS18 0.042 splicing factor, arginine/serine-rich 130 CDC2L1 0.041 cell division cycle 2-like 1 (PITSLRE proteins) isof... MYT1L 0.040 myelin transcription factor 1-like RPGR 0.040 retinitis pigmentosa GTPase regulator isoform C [Hom... ZEB1 0.037 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.037 zinc finger E-box binding homeobox 1 isoform b [Hom... MYT1 0.036 myelin transcription factor 1 RBM25 0.036 RNA binding motif protein 25 PELP1 0.036 proline, glutamic acid and leucine rich protein 1 [... HRC 0.036 histidine rich calcium binding protein precursor [Hom... CYLC1 0.036 cylicin, basic protein of sperm head cytoskeleton 1... MYST3 0.034 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.034 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.034 MYST histone acetyltransferase (monocytic leukemia)... SRCAP 0.034 Snf2-related CBP activator protein ZC3H13 0.034 zinc finger CCCH-type containing 13 YTHDF1 0.034 YTH domain family, member 1 LOC100286959 0.033 PREDICTED: hypothetical protein XP_002343921 TCHH 0.033 trichohyalin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.