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Search of human proteins with 21361086
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361086 tumor necrosis factor receptor superfamily, member
10a [Homo sapiens]
(468 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361086 tumor necrosis factor receptor superfamily, member 1... 968 0.0
gi|224494026 tumor necrosis factor receptor superfamily, member ... 403 e-112
gi|224494019 tumor necrosis factor receptor superfamily, member ... 398 e-111
gi|22547108 tumor necrosis factor receptor superfamily, member 1... 265 9e-71
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 189 5e-48
gi|23510423 tumor necrosis factor receptor superfamily, member 6... 72 8e-13
gi|4507583 tumor necrosis factor receptor superfamily, member 6 ... 72 8e-13
gi|23510421 tumor necrosis factor receptor superfamily, member 6... 63 7e-10
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 55 1e-07
gi|148743793 osteoprotegerin precursor [Homo sapiens] 53 5e-07
gi|4505039 lymphotoxin beta receptor [Homo sapiens] 52 2e-06
gi|14790170 tumor necrosis factor receptor superfamily, member 6... 51 3e-06
gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 51 3e-06
gi|68348711 tumor necrosis factor receptor superfamily, member 8... 50 4e-06
gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 48 2e-05
gi|4505393 nerve growth factor receptor precursor [Homo sapiens] 47 3e-05
gi|7657039 tumor necrosis factor receptor superfamily, member 21... 46 6e-05
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 46 8e-05
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 45 2e-04
gi|23200025 tumor necrosis factor receptor superfamily, member 2... 44 4e-04
gi|23200021 tumor necrosis factor receptor superfamily, member 2... 44 4e-04
gi|4507569 tumor necrosis factor receptor superfamily, member 25... 44 4e-04
gi|10190748 CEGP1 protein [Homo sapiens] 43 5e-04
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 42 0.002
gi|23200041 tumor necrosis factor receptor superfamily, member 1... 41 0.002
gi|23200023 tumor necrosis factor receptor superfamily, member 2... 41 0.003
gi|32528301 EPH receptor B4 precursor [Homo sapiens] 38 0.017
gi|40217843 cartilage oligomeric matrix protein precursor [Homo ... 38 0.017
gi|153792110 HEG homolog 1 [Homo sapiens] 38 0.023
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 37 0.029
>gi|21361086 tumor necrosis factor receptor superfamily, member 10a
[Homo sapiens]
Length = 468
Score = 968 bits (2502), Expect = 0.0
Identities = 468/468 (100%), Positives = 468/468 (100%)
Query: 1 MAPPPARVHLGAFLAVTPNPGSAASGTEAAAATPSKVWGSSAGRIEPRGGGRGALPTSMG 60
MAPPPARVHLGAFLAVTPNPGSAASGTEAAAATPSKVWGSSAGRIEPRGGGRGALPTSMG
Sbjct: 1 MAPPPARVHLGAFLAVTPNPGSAASGTEAAAATPSKVWGSSAGRIEPRGGGRGALPTSMG 60
Query: 61 QHGPSARARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHDQSIGT 120
QHGPSARARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHDQSIGT
Sbjct: 61 QHGPSARARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHDQSIGT 120
Query: 121 QQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPC 180
QQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPC
Sbjct: 121 QQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPC 180
Query: 181 TTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNI 240
TTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNI
Sbjct: 181 TTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNI 240
Query: 241 WVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEIL 300
WVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEIL
Sbjct: 241 WVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEIL 300
Query: 301 SNADSLSTFVSEQQMESQEPADLTGVTVQSPGEAQCLLGPAEAEGSQRRRLLVPANGADP 360
SNADSLSTFVSEQQMESQEPADLTGVTVQSPGEAQCLLGPAEAEGSQRRRLLVPANGADP
Sbjct: 301 SNADSLSTFVSEQQMESQEPADLTGVTVQSPGEAQCLLGPAEAEGSQRRRLLVPANGADP 360
Query: 361 TETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTG 420
TETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTG
Sbjct: 361 TETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTG 420
Query: 421 RNASIHTLLDALERMEERHAKEKIQDLLVDSGKFIYLEDGTGSAVSLE 468
RNASIHTLLDALERMEERHAKEKIQDLLVDSGKFIYLEDGTGSAVSLE
Sbjct: 421 RNASIHTLLDALERMEERHAKEKIQDLLVDSGKFIYLEDGTGSAVSLE 468
>gi|224494026 tumor necrosis factor receptor superfamily, member 10b
isoform 2 precursor [Homo sapiens]
Length = 411
Score = 403 bits (1036), Expect = e-112
Identities = 232/423 (54%), Positives = 271/423 (64%), Gaps = 32/423 (7%)
Query: 60 GQHGPSAR-ARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHD--- 115
GQ+ P+A AR PGPR AR A P RV KT VV VLL +V + +A I D
Sbjct: 5 GQNAPAASGARKRHGPGPREARGARPGPRVPKTLVLVVAAVLL-LVSAESALITQQDLAP 63
Query: 116 -QSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDE 174
Q QQ SP LCPPG H SE C C G Y+ N+L CL CT C S E
Sbjct: 64 QQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGE 123
Query: 175 EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKES 234
E SPCTTTRNT CQC+ GTFR ++S EMCRKC GCPRGMVKV DCTPWSDIECVHKES
Sbjct: 124 VELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHKES 183
Query: 235 GNGHNIWVILVVTLVVPLLLVAVLIVCCC-----------IGSGCGGDPKCMDRVCFWRL 283
G +I+ VT+ +L+VAV + I SG GGDP+ +DR
Sbjct: 184 G------IIIGVTVAAVVLIVAVFVCKSLLWKKVLPYLKGICSGGGGDPERVDRSS---- 233
Query: 284 GLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSPGEAQCLLGPAEA 343
+ PGAEDN NEI+S T V EQ+ME QEPA+ TGV + SPGE++ LL PAEA
Sbjct: 234 ---QRPGAEDNVLNEIVSILQP--TQVPEQEMEVQEPAEPTGVNMLSPGESEHLLEPAEA 288
Query: 344 EGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAG 403
E SQRRRLLVPAN DPTETL FD FA++VPFDSW+ LMR+L L NEI V +A AG
Sbjct: 289 ERSQRRRLLVPANEGDPTETLRQCFDDFADLVPFDSWEPLMRKLGLMDNEIKVAKAEAAG 348
Query: 404 PGDALYAMLMKWVNKTGRNASIHTLLDALERMEERHAKEKIQDLLVDSGKFIYLEDGTGS 463
D LY ML+KWVNKTGR+AS+HTLLDALE + ER AK+KI+D L+ SGKF+YLE S
Sbjct: 349 HRDTLYTMLIKWVNKTGRDASVHTLLDALETLGERLAKQKIEDHLLSSGKFMYLEGNADS 408
Query: 464 AVS 466
A+S
Sbjct: 409 AMS 411
>gi|224494019 tumor necrosis factor receptor superfamily, member 10b
isoform 1 precursor [Homo sapiens]
Length = 440
Score = 398 bits (1022), Expect = e-111
Identities = 233/446 (52%), Positives = 273/446 (61%), Gaps = 49/446 (10%)
Query: 60 GQHGPSAR-ARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHD--- 115
GQ+ P+A AR PGPR AR A P RV KT VV VLL +V + +A I D
Sbjct: 5 GQNAPAASGARKRHGPGPREARGARPGPRVPKTLVLVVAAVLL-LVSAESALITQQDLAP 63
Query: 116 -QSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDE 174
Q QQ SP LCPPG H SE C C G Y+ N+L CL CT C S E
Sbjct: 64 QQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGE 123
Query: 175 EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKES 234
E SPCTTTRNT CQC+ GTFR ++S EMCRKC GCPRGMVKV DCTPWSDIECVHKES
Sbjct: 124 VELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHKES 183
Query: 235 GNGHN-----------------------IWVILVVTLVVPLLLVAVLIVCCC-------- 263
G H+ +I+ VT+ +L+VAV +
Sbjct: 184 GTKHSGEVPAVEETVTSSPGTPASPCSLSGIIIGVTVAAVVLIVAVFVCKSLLWKKVLPY 243
Query: 264 ---IGSGCGGDPKCMDRVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEP 320
I SG GGDP+ +DR + PGAEDN NEI+S T V EQ+ME QEP
Sbjct: 244 LKGICSGGGGDPERVDRSS-------QRPGAEDNVLNEIVSILQP--TQVPEQEMEVQEP 294
Query: 321 ADLTGVTVQSPGEAQCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSW 380
A+ TGV + SPGE++ LL PAEAE SQRRRLLVPAN DPTETL FD FA++VPFDSW
Sbjct: 295 AEPTGVNMLSPGESEHLLEPAEAERSQRRRLLVPANEGDPTETLRQCFDDFADLVPFDSW 354
Query: 381 DQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDALERMEERHA 440
+ LMR+L L NEI V +A AG D LY ML+KWVNKTGR+AS+HTLLDALE + ER A
Sbjct: 355 EPLMRKLGLMDNEIKVAKAEAAGHRDTLYTMLIKWVNKTGRDASVHTLLDALETLGERLA 414
Query: 441 KEKIQDLLVDSGKFIYLEDGTGSAVS 466
K+KI+D L+ SGKF+YLE SA+S
Sbjct: 415 KQKIEDHLLSSGKFMYLEGNADSAMS 440
>gi|22547108 tumor necrosis factor receptor superfamily, member 10d
precursor [Homo sapiens]
Length = 386
Score = 265 bits (676), Expect = 9e-71
Identities = 167/339 (49%), Positives = 199/339 (58%), Gaps = 37/339 (10%)
Query: 60 GQHGPSAR-ARAGRAPGPRPAREASPRLRVHKTFKFVV--VGVLLQVVPSSAATIKLHD- 115
GQ P+A ARAGR PG R A P L K KFVV V VLL V SA TI D
Sbjct: 5 GQSVPTASSARAGRYPGARTASGTRPWLLDPKILKFVVFIVAVLLPVRVDSA-TIPRQDE 63
Query: 116 ---QSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKS 172
Q++ QQ S E CP GSHRSE+ GACN CTEGV YT ASNNL +CL CT CKS
Sbjct: 64 VPQQTVAPQQQRRSLKEEECPAGSHRSEYTGACNPCTEGVDYTIASNNLPSCLLCTVCKS 123
Query: 173 DEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHK 232
+ +S CTTTR+T CQC+ G+F++ NS EMCR C GCPRGMVKV +CTP SDI+C ++
Sbjct: 124 GQTNKSSCTTTRDTVCQCEKGSFQDKNSPEMCRTCRTGCPRGMVKVSNCTPRSDIKCKNE 183
Query: 233 ESGNGHN--------------------IWVILVVTLVVPLLLVAVLIVC--------CCI 264
+ + ++I++V LV+ L +V V C I
Sbjct: 184 SAASSTGKTPAAEETVTTILGMLASPYHYLIIIVVLVIILAVVVVGFSCRKKFISYLKGI 243
Query: 265 GSGCGGDPKCMDRVCFWRLGL-LRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADL 323
SG GG P+ + RV F R R PGAEDNA NE LSN T VSEQ+++ QE A+L
Sbjct: 244 CSGGGGGPERVHRVLFRRRSCPSRVPGAEDNARNETLSNRYLQPTQVSEQEIQGQELAEL 303
Query: 324 TGVTVQSPGEAQCLLGPAEAEGSQRRRLLVPANGADPTE 362
TGVTV+ P E Q LL AEAEG QRRRLLVP N AD +
Sbjct: 304 TGVTVELPEEPQRLLEQAEAEGCQRRRLLVPVNDADSAD 342
Score = 49.3 bits (116), Expect = 7e-06
Identities = 27/45 (60%), Positives = 29/45 (64%)
Query: 422 NASIHTLLDALERMEERHAKEKIQDLLVDSGKFIYLEDGTGSAVS 466
+A I TLLDA +EE HAKE IQD LV S K Y ED GSA S
Sbjct: 340 SADISTLLDASATLEEGHAKETIQDQLVGSEKLFYEEDEAGSATS 384
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 189 bits (480), Expect = 5e-48
Identities = 93/155 (60%), Positives = 109/155 (70%), Gaps = 6/155 (3%)
Query: 87 RVHKTFKFVVV--GVLLQVVPSSAATIKLHD---QSIGTQQWEHSPLGELCPPGSHRSEH 141
R+ KT KFVVV VLL V+ SA T + + Q++ QQ HS GE CP GSHRSEH
Sbjct: 3 RIPKTLKFVVVIVAVLLPVLAYSATTARQEEVPQQTVAPQQQRHSFKGEECPAGSHRSEH 62
Query: 142 PGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSA 201
GACN CTEGV YTNASNN +C PCT CKSD++ +S CT TR+T CQCK GTFRN+NS
Sbjct: 63 TGACNPCTEGVDYTNASNNEPSCFPCTVCKSDQKHKSSCTMTRDTVCQCKEGTFRNENSP 122
Query: 202 EMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGN 236
EMCRKCSR CP G V+V +CT W DI+CV + N
Sbjct: 123 EMCRKCSR-CPSGEVQVSNCTSWDDIQCVEEFGAN 156
>gi|23510423 tumor necrosis factor receptor superfamily, member 6
isoform 3 precursor [Homo sapiens]
Length = 220
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 122 QWEHSPLGELCPPGSHRS-------EHPGACNRCTEGVGYTNASNNLFACLPCTACKSDE 174
Q+ H P CPPG ++ + P C C EG YT+ ++ C C C
Sbjct: 57 QFCHKP----CPPGERKARDCTVNGDEPD-CVPCQEGKEYTDKAHFSSKCRRCRLCDEGH 111
Query: 175 --EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHK 232
E CT T+NT C+CKP F N E C C++ C G+ +K+CT S+ +C K
Sbjct: 112 GLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTK-CEHGI--IKECTLTSNTKC--K 166
Query: 233 ESGNGHNIWVILVVTLVVPLLL 254
E G+ N+ + ++ L +PL++
Sbjct: 167 EEGSRSNLGWLCLLLLPIPLIV 188
>gi|4507583 tumor necrosis factor receptor superfamily, member 6
isoform 1 precursor [Homo sapiens]
Length = 335
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 122 QWEHSPLGELCPPGSHRS-------EHPGACNRCTEGVGYTNASNNLFACLPCTACKSDE 174
Q+ H P CPPG ++ + P C C EG YT+ ++ C C C
Sbjct: 57 QFCHKP----CPPGERKARDCTVNGDEPD-CVPCQEGKEYTDKAHFSSKCRRCRLCDEGH 111
Query: 175 --EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHK 232
E CT T+NT C+CKP F N E C C++ C G+ +K+CT S+ +C K
Sbjct: 112 GLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTK-CEHGI--IKECTLTSNTKC--K 166
Query: 233 ESGNGHNIWVILVVTLVVPLLL 254
E G+ N+ + ++ L +PL++
Sbjct: 167 EEGSRSNLGWLCLLLLPIPLIV 188
>gi|23510421 tumor necrosis factor receptor superfamily, member 6
isoform 2 precursor [Homo sapiens]
Length = 314
Score = 62.8 bits (151), Expect = 7e-10
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 122 QWEHSPLGELCPPGSHRS-------EHPGACNRCTEGVGYTNASNNLFACLPCTACKSDE 174
Q+ H P CPPG ++ + P C C EG YT+ ++ C C C
Sbjct: 57 QFCHKP----CPPGERKARDCTVNGDEPD-CVPCQEGKEYTDKAHFSSKCRRCRLCDEGH 111
Query: 175 --EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIEC 229
E CT T+NT C+CKP F N E C C++ C G+ +K+CT S+ +C
Sbjct: 112 GLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTK-CEHGI--IKECTLTSNTKC 165
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 55.5 bits (132), Expect = 1e-07
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 132 CPPGSHRS-----EHPGACNRCTEGVGYTNASNNLFACLPC-TACKSDEEERSPCTTTRN 185
C PG H C+ C + YT N + CL C + C SD+ E CT +N
Sbjct: 57 CSPGQHAKVFCTKTSDTVCDSCEDST-YTQLWNWVPECLSCGSRCSSDQVETQACTREQN 115
Query: 186 TACQCKPGTFRNDNSAEMCRKCS--RGCPRGMVKVKDCTPWSDIEC 229
C C+PG + + E CR C+ R C G + T SD+ C
Sbjct: 116 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVC 161
Score = 31.6 bits (70), Expect = 1.6
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 167 CTACKSDEEERSPCTTTRNTAC-QCKPGTFRN-DNSAEMCRKCSRGCPRGMVKVKDCT 222
C+ C + + CT T +T C C+ T+ N C C C V+ + CT
Sbjct: 54 CSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT 111
>gi|148743793 osteoprotegerin precursor [Homo sapiens]
Length = 401
Score = 53.1 bits (126), Expect = 5e-07
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 121 QQWEHSPLGELCPPGSHRSEHPGA-----CNRCTEGVGYTNASNNLFACLPCT-ACKSDE 174
++ H L + CPPG++ +H A C C + YT++ + CL C+ CK +
Sbjct: 33 EETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHY-YTDSWHTSDECLYCSPVCKELQ 91
Query: 175 EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIEC 229
+ C T N C+CK G + E C K R CP G V+ TP + C
Sbjct: 92 YVKQECNRTHNRVCECKEGRYL---EIEFCLK-HRSCPPGFGVVQAGTPERNTVC 142
>gi|4505039 lymphotoxin beta receptor [Homo sapiens]
Length = 435
Score = 51.6 bits (122), Expect = 2e-06
Identities = 42/144 (29%), Positives = 58/144 (40%), Gaps = 18/144 (12%)
Query: 103 VVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSE-----HPGACNRCTEGVGYTNA 157
V P ++ DQ + +H CPPG++ S C C E Y
Sbjct: 33 VPPYASENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKCSRIRDTVCATCAEN-SYNEH 91
Query: 158 SNNLFACLPCTACKS--DEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGM 215
N L C C C EE +PCT+ R T C+C+PG F + E C C
Sbjct: 92 WNYLTICQLCRPCDPVMGLEEIAPCTSKRKTQCRCQPGMFCAAWALE-CTHCE------- 143
Query: 216 VKVKDCTPWSDIECVHKESGNGHN 239
+ DC P ++ E + E G G+N
Sbjct: 144 -LLSDCPPGTEAE-LKDEVGKGNN 165
>gi|14790170 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 50.8 bits (120), Expect = 3e-06
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 120 TQQWEHSPLGEL-----CPPGSH-----RSEHPGACNRCTEGVGYTNASNNLFACLPCTA 169
T W + GE CPPG+ R + P C C YT N L C C
Sbjct: 35 TYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCPPR-HYTQFWNYLERCRYCNV 93
Query: 170 -CKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIE 228
C EEE C T N AC+C+ G F + A C + CP G + TP + +
Sbjct: 94 LCGEREEEARACHATHNRACRCRTGFFAH---AGFCLE-HASCPPGAGVIAPGTPSQNTQ 149
Query: 229 C 229
C
Sbjct: 150 C 150
>gi|4507585 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 50.8 bits (120), Expect = 3e-06
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 120 TQQWEHSPLGEL-----CPPGSH-----RSEHPGACNRCTEGVGYTNASNNLFACLPCTA 169
T W + GE CPPG+ R + P C C YT N L C C
Sbjct: 35 TYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCPPR-HYTQFWNYLERCRYCNV 93
Query: 170 -CKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIE 228
C EEE C T N AC+C+ G F + A C + CP G + TP + +
Sbjct: 94 LCGEREEEARACHATHNRACRCRTGFFAH---AGFCLE-HASCPPGAGVIAPGTPSQNTQ 149
Query: 229 C 229
C
Sbjct: 150 C 150
>gi|68348711 tumor necrosis factor receptor superfamily, member 8
isoform 1 precursor [Homo sapiens]
Length = 595
Score = 50.1 bits (118), Expect = 4e-06
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 132 CP----PGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTA 187
CP P + P C + E Y + ++ AC+ C+ + D E++PC +
Sbjct: 48 CPMGLFPTQQCPQRPTDCRKQCEPDYYLDEADRCTACVTCS--RDDLVEKTPCAWNSSRV 105
Query: 188 CQCKPGTFRNDNSAEMCRKC--SRGCPRGMV 216
C+C+PG F + ++ C +C CP GM+
Sbjct: 106 CECRPGMFCSTSAVNSCARCFFHSVCPAGMI 136
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 36/185 (19%)
Query: 23 AASGTEAAAATPSKVWGSSAGRIEPRGGGRGALPTSMGQHGPSARARAGRAPGPRPAREA 82
A+ G A A+P S+G I A PT + SA R G R A+EA
Sbjct: 152 ASPGVSPACASPENCKEPSSGTIPQ------AKPTPVSPATSSASTMPVRG-GTRLAQEA 204
Query: 83 SPRLRVHKTFKFVVVGVLLQVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHP 142
+ +L P S +++ G SP + CP GS
Sbjct: 205 ASKLTR---------------APDSPSSVGRPSSDPGL-----SPT-QPCPEGS------ 237
Query: 143 GACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAE 202
G C + E Y + + AC+ C+ + D E++PC + C+C+PG ++
Sbjct: 238 GDCRKQCEPDYYLDEAGRCTACVSCS--RDDLVEKTPCAWNSSRTCECRPGMICATSATN 295
Query: 203 MCRKC 207
+C
Sbjct: 296 SRARC 300
>gi|4507575 tumor necrosis factor receptor 1 precursor [Homo
sapiens]
Length = 455
Score = 48.1 bits (113), Expect = 2e-05
Identities = 94/444 (21%), Positives = 151/444 (34%), Gaps = 106/444 (23%)
Query: 95 VVVGVLLQVVPSSAATIKLH-------DQSIGTQQWEHSPLGELCPPGSHRSEH------ 141
V++ +L+ + PS + H D ++ H +C H+ +
Sbjct: 14 VLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCP 73
Query: 142 -PGA---CNRCTEGVGYTNASNNLFACLPCTACKSD--EEERSPCTTTRNTACQCKPGTF 195
PG C C G +T + N+L CL C+ C+ + + E S CT R+T C C+ +
Sbjct: 74 GPGQDTDCRECESG-SFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQY 132
Query: 196 RNDNSAEM-----CRKCSRG--------------------------------CPRGMVKV 218
R+ S + C C G C + +
Sbjct: 133 RHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECT 192
Query: 219 KDCTPWSDIECVHKESGNGHNIWVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRV 278
K C P IE V +G V+L + + L L+++L + K V
Sbjct: 193 KLCLP--QIENVKGTEDSGTT--VLLPLVIFFGLCLLSLLFIGLMYRYQ-RWKSKLYSIV 247
Query: 279 CF----WRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSPGEA 334
C + G L G + A N S + + + S + T + +PG+
Sbjct: 248 CGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPS---STFTSSSTYTPGDC 304
Query: 335 QCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFAN--------------------- 373
P RR + P GADP L D N
Sbjct: 305 PNFAAP-------RREVAPPYQGADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPA 357
Query: 374 -------IVPFDSWDQLMRQLDLTKNEIDVVRAGTAG-PGDALYAMLMKWVNKT-GRNAS 424
VP W + +R+L L+ +EID + +A Y+ML W +T R A+
Sbjct: 358 TLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREAT 417
Query: 425 IHTLLDALERMEERHAKEKIQDLL 448
+ L L M+ E I++ L
Sbjct: 418 LELLGRVLRDMDLLGCLEDIEEAL 441
>gi|4505393 nerve growth factor receptor precursor [Homo sapiens]
Length = 427
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 40/125 (32%)
Query: 145 CNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNS--AE 202
C C + V +++ + C PCT C + +PC + C+C G ++++ + E
Sbjct: 64 CEPCLDSVTFSDVVSATEPCKPCTECVGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCE 123
Query: 203 MCRKCSRG-----------------CPRGMV---------------------KVKDCTPW 224
CR C G CP G ++++CT W
Sbjct: 124 ACRVCEAGSGLVFSCQDKQNTVCEECPDGTYSDEANHVDPCLPCTVCEDTERQLRECTRW 183
Query: 225 SDIEC 229
+D EC
Sbjct: 184 ADAEC 188
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 145 CNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPG 193
C C +G Y++ +N++ CLPCT C+ E + CT + C+ PG
Sbjct: 146 CEECPDGT-YSDEANHVDPCLPCTVCEDTERQLRECTRWADAECEEIPG 193
>gi|7657039 tumor necrosis factor receptor superfamily, member 21
precursor [Homo sapiens]
Length = 655
Score = 46.2 bits (108), Expect = 6e-05
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 165 LPCTACKSDEEERSPCTTTRNTACQ-CKPGTF-RNDNSAEMCRKCSRGCPRGMVKVKDCT 222
L C C + CT T C C GTF R++N E C CS+ CP M++ C
Sbjct: 65 LTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCA 124
Query: 223 PWSDIEC 229
+D EC
Sbjct: 125 ALTDREC 131
Score = 43.5 bits (101), Expect = 4e-04
Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 18/172 (10%)
Query: 71 GRAPGPRPAREASPRLRVHKTFKFVVVGVLLQ--VVPSSAATIKLHDQSIGTQQWEHSPL 128
G +P A + R+ T + +LL + ++A + IGT +
Sbjct: 2 GTSPSSSTALASCSRIARRATATMIAGSLLLLGFLSTTTAQPEQKASNLIGTYRHVDRAT 61
Query: 129 GEL-----CPPGSHRSEHPG-----ACNRCTEGVGYTNASNNLFACLPCTA-CKSDEEER 177
G++ CP G++ SEH C+ C G +T N + C C+ C E+
Sbjct: 62 GQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGT-FTRHENGIEKCHDCSQPCPWPMIEK 120
Query: 178 SPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIEC 229
PC + C C PG F+++ + CP G K T D+ C
Sbjct: 121 LPCAALTDRECTCPPGMFQSNATCAP----HTVCPVGWGVRKKGTETEDVRC 168
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 45.8 bits (107), Expect = 8e-05
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 132 CPPGS------HRSEHPGACNRCTEGVGYTNASNNLFACLPCTAC--KSDEEERSPCTTT 183
C PG+ RS++ C C G G+ N + C PCT C +S E + CT T
Sbjct: 46 CRPGNGMVSRCSRSQNT-VCRPC--GPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTAT 102
Query: 184 RNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKD---CTPWSDIECVHKES 234
++T C+C+ GT D S + C+ CP G D C PW++ K +
Sbjct: 103 QDTVCRCRAGTQPLD-SYKPGVDCA-PCPPGHFSPGDNQACKPWTNCTLAGKHT 154
Score = 33.9 bits (76), Expect = 0.33
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 152 VGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQ-CKPGTFRNDNSAEMCRKCS-R 209
VG T SN+ C C C+ S C+ ++NT C+ C PG + + S++ C+ C+
Sbjct: 32 VGDTYPSND--RC--CHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWC 87
Query: 210 GCPRGMVKVKDCTPWSDIEC 229
G + + CT D C
Sbjct: 88 NLRSGSERKQLCTATQDTVC 107
>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
Length = 993
Score = 44.7 bits (104), Expect = 2e-04
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 15/121 (12%)
Query: 102 QVVPSSAATIKLHDQSIGTQQWE----HSPLGEL--------CPPGSHRSEHPGACNRCT 149
Q VP A T + + + H PLG CPPG H + C C
Sbjct: 651 QCVPCPAGTFQEREGQLSCDLCPGSDAHGPLGATNVTTCAGQCPPGQHSVDGFKPCQPCP 710
Query: 150 EGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSR 209
G A L C PC + + E + +T QC PG + N S C +C+
Sbjct: 711 RGTYQPEAGRTL--CFPCGGGLTTKHEGAISFQDCDTKVQCSPGHYYN-TSIHRCIRCAM 767
Query: 210 G 210
G
Sbjct: 768 G 768
>gi|23200025 tumor necrosis factor receptor superfamily, member 25
isoform 4 precursor [Homo sapiens]
Length = 372
Score = 43.5 bits (101), Expect = 4e-04
Identities = 81/302 (26%), Positives = 109/302 (36%), Gaps = 57/302 (18%)
Query: 158 SNNLFACLPCTACKSDEEERSPCTTTRNTAC-QCKPGTFRNDNSAEMCRKCSRG-CPRGM 215
S++ F C PC C + + R+T C C PG + + + C + G CP
Sbjct: 87 SSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCLPGFYEHGDGCVSCPTSTLGSCPERC 146
Query: 216 VKVKDCTPWSDIECVHKESGNGHNIWV-ILVVTLVVPLLLVAVLIV----CCCIGSGCGG 270
V G WV +L+ LVVPLLL A L C
Sbjct: 147 AAV---------------CGWRQMFWVQVLLAGLVVPLLLGATLTYTYRHCWPHKPLVTA 191
Query: 271 DPKCMDRVCFWRLGLLRGPGAE-----DNAHNEILSNADSLSTFVSEQQM---------E 316
D M+ L P A D+AH +L+ DS + Q + E
Sbjct: 192 DEAGME--------ALTPPPATHLSPLDSAHT-LLAPPDSSEKICTVQLVGNSWTPGYPE 242
Query: 317 SQEP--ADLTGVTVQSPGEAQCLLGPAEAEG-SQRRRLLVPANGADPTETLMLFFDKFAN 373
+QE +T Q P A LGPA A S PA P L D
Sbjct: 243 TQEALCPQVTWSWDQLPSRA---LGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMD---- 295
Query: 374 IVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDALE 433
VP W + +R L L + EI+ V D Y ML +W + + A + + ALE
Sbjct: 296 AVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRW--RQQQPAGLGAVYAALE 353
Query: 434 RM 435
RM
Sbjct: 354 RM 355
>gi|23200021 tumor necrosis factor receptor superfamily, member 25
isoform 1 precursor [Homo sapiens]
Length = 426
Score = 43.5 bits (101), Expect = 4e-04
Identities = 82/304 (26%), Positives = 112/304 (36%), Gaps = 52/304 (17%)
Query: 158 SNNLFACLPCTACKSDEEERSPCTTTRNTAC-QCKPGTFRNDNSAEMCRKCSRGCPRGMV 216
S++ F C PC C + + R+T C C PG + + + C C P
Sbjct: 132 SSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCLPGFYEHGDG---CVSCPTPPPS--- 185
Query: 217 KVKDCTPWSDIECVHKESGNGHNI---WV-ILVVTLVVPLLLVAVLIV----CCCIGSGC 268
PW ++ S G + WV +L+ LVVPLLL A L C
Sbjct: 186 --LAGAPWGAVQSAVPLSVAGGRVGVFWVQVLLAGLVVPLLLGATLTYTYRHCWPHKPLV 243
Query: 269 GGDPKCMDRVCFWRLGLLRGPGAE-----DNAHNEILSNADSLSTFVSEQQM-------- 315
D M+ L P A D+AH +L+ DS + Q +
Sbjct: 244 TADEAGME--------ALTPPPATHLSPLDSAHT-LLAPPDSSEKICTVQLVGNSWTPGY 294
Query: 316 -ESQEP--ADLTGVTVQSPGEAQCLLGPAEAEG-SQRRRLLVPANGADPTETLMLFFDKF 371
E+QE +T Q P A LGPA A S PA P L D
Sbjct: 295 PETQEALCPQVTWSWDQLPSRA---LGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMD-- 349
Query: 372 ANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDA 431
VP W + +R L L + EI+ V D Y ML +W + + A + + A
Sbjct: 350 --AVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRW--RQQQPAGLGAVYAA 405
Query: 432 LERM 435
LERM
Sbjct: 406 LERM 409
>gi|4507569 tumor necrosis factor receptor superfamily, member 25
isoform 2 precursor [Homo sapiens]
Length = 417
Score = 43.5 bits (101), Expect = 4e-04
Identities = 81/302 (26%), Positives = 109/302 (36%), Gaps = 57/302 (18%)
Query: 158 SNNLFACLPCTACKSDEEERSPCTTTRNTAC-QCKPGTFRNDNSAEMCRKCSRG-CPRGM 215
S++ F C PC C + + R+T C C PG + + + C + G CP
Sbjct: 132 SSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCLPGFYEHGDGCVSCPTSTLGSCPERC 191
Query: 216 VKVKDCTPWSDIECVHKESGNGHNIWV-ILVVTLVVPLLLVAVLIV----CCCIGSGCGG 270
V G WV +L+ LVVPLLL A L C
Sbjct: 192 AAV---------------CGWRQMFWVQVLLAGLVVPLLLGATLTYTYRHCWPHKPLVTA 236
Query: 271 DPKCMDRVCFWRLGLLRGPGAE-----DNAHNEILSNADSLSTFVSEQQM---------E 316
D M+ L P A D+AH +L+ DS + Q + E
Sbjct: 237 DEAGME--------ALTPPPATHLSPLDSAHT-LLAPPDSSEKICTVQLVGNSWTPGYPE 287
Query: 317 SQEP--ADLTGVTVQSPGEAQCLLGPAEAEG-SQRRRLLVPANGADPTETLMLFFDKFAN 373
+QE +T Q P A LGPA A S PA P L D
Sbjct: 288 TQEALCPQVTWSWDQLPSRA---LGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMD---- 340
Query: 374 IVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDALE 433
VP W + +R L L + EI+ V D Y ML +W + + A + + ALE
Sbjct: 341 AVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRW--RQQQPAGLGAVYAALE 398
Query: 434 RM 435
RM
Sbjct: 399 RM 400
>gi|10190748 CEGP1 protein [Homo sapiens]
Length = 999
Score = 43.1 bits (100), Expect = 5e-04
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 121 QQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPC 180
+ W S G LC PG + ++ C C G A +C PC + + + +
Sbjct: 687 EAWNMSECGGLCQPGEYSADGFAPCQLCALGTFQPEAGRT--SCFPCGGGLATKHQGATS 744
Query: 181 TTTRNTACQCKPGTFRNDNSAEMCRKCSRG 210
T QC PG F N + C +C G
Sbjct: 745 FQDCETRVQCSPGHFYN-TTTHRCIRCPVG 773
Score = 33.1 bits (74), Expect = 0.55
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 151 GVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRG 210
GVG +A N C+ C A + R C C GTF+N+ C C R
Sbjct: 628 GVGQGHAENQ---CVSCRAGTYYDGARERCIL-------CPNGTFQNEEGQMTCEPCPRP 677
Query: 211 CPRGMVKVKDCTPWSDIEC 229
G +K + W+ EC
Sbjct: 678 GNSGALKTPEA--WNMSEC 694
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 292 EDNAHNEILSNADSLS--TFVSEQQMESQEPADLTGVTVQSPGEAQCLLGPAEAEGSQRR 349
E +E+ +S S T +SE Q P+ T EA L +E GS++R
Sbjct: 4018 EKKMQSELSDEEESTSRNTSLSETSRGGQ-PSVTTKSARDKKTEAAPLKSKSEKAGSEKR 4076
Query: 350 --RLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKNEIDVVRAGTAGPGDA 407
R P + + T+ M + SW +L R+L+ + +EI+ +R P
Sbjct: 4077 SSRRTGPQSPCERTDIRMAIVADHLGL----SWTELARELNFSVDEINQIRV--ENPNSL 4130
Query: 408 L---YAMLMKWVNKTGRNASIHTLLDALERMEERHAKEKIQDLLVDSG 452
+ + +L KWV + G+NA+ L L ++ ++ + D G
Sbjct: 4131 ISQSFMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLEGPIFDYG 4178
>gi|23200041 tumor necrosis factor receptor superfamily, member 14
precursor [Homo sapiens]
Length = 283
Score = 41.2 bits (95), Expect = 0.002
Identities = 39/169 (23%), Positives = 57/169 (33%), Gaps = 39/169 (23%)
Query: 132 CPPGSHRSEHPG-----ACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSP--CTTTR 184
C PG E G C C G Y N L CL C C R+ C+ T
Sbjct: 57 CSPGYRVKEACGELTGTVCEPCPPGT-YIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTE 115
Query: 185 NTACQCKPGTFRNDNSAEMCRKC-----------------------SRGCPRGMVK---- 217
N C C PG F + C C + CP G
Sbjct: 116 NAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNGT 175
Query: 218 VKDCTPWSDIECVHKESGNG----HNIWVILVVTLVVPLLLVAVLIVCC 262
+++C + + ++G G H +W L +LV+ ++ V ++ C
Sbjct: 176 LEECQHQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIIC 224
>gi|23200023 tumor necrosis factor receptor superfamily, member 25
isoform 3 precursor [Homo sapiens]
Length = 380
Score = 40.8 bits (94), Expect = 0.003
Identities = 83/348 (23%), Positives = 120/348 (34%), Gaps = 61/348 (17%)
Query: 125 HSPLGELCP---PGSHRSEHP-------GACNRCTEGVGYTNASNNLFACLPCTAC--KS 172
H +G C P H + P C C + +++ C C AC ++
Sbjct: 40 HKKIGLFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQA 99
Query: 173 DEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPW---SDIEC 229
+ C+ +T C CKPG F ++ C P DC + + C
Sbjct: 100 SQVALENCSAVADTRCGCKPGWFVECQVSQ----CVSSSPFYCQPCLDCGALHRHTRLLC 155
Query: 230 VHKESGNGHNIWVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMDRVCFWR-----LG 284
+++ G +P C S G P+ VC WR +
Sbjct: 156 SRRDTDCG----------TCLPGFYEHGDGCVSCPTSTLGSCPERCAAVCGWRQNEAGME 205
Query: 285 LLRGPGAE-----DNAHNEILSNADSLSTFVSEQQM---------ESQEPA--DLTGVTV 328
L P A D+AH +L+ DS + Q + E+QE +T
Sbjct: 206 ALTPPPATHLSPLDSAHT-LLAPPDSSEKICTVQLVGNSWTPGYPETQEALCPQVTWSWD 264
Query: 329 QSPGEAQCLLGPAEAEG-SQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQL 387
Q P A LGPA A S PA P L D VP W + +R L
Sbjct: 265 QLPSRA---LGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMDA----VPARRWKEFVRTL 317
Query: 388 DLTKNEIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDALERM 435
L + EI+ V D Y ML +W + + A + + ALERM
Sbjct: 318 GLREAEIEAVEVEIGRFRDQQYEMLKRW--RQQQPAGLGAVYAALERM 363
>gi|32528301 EPH receptor B4 precursor [Homo sapiens]
Length = 987
Score = 38.1 bits (87), Expect = 0.017
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 100 LLQVVPSSAATIKLHDQSIGTQQWEHSPL-GELCPPGSHRSEHPGACNRCTEGVGYTNAS 158
++ VP+ + L+ + G QW P+ G C PG +E C C +G +
Sbjct: 224 VVDAVPAPGPSPSLYCREDG--QWAEQPVTGCSCAPGFEAAEGNTKCRACAQGTFKPLSG 281
Query: 159 NNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFR 196
+C PC A S T + CQC+ G FR
Sbjct: 282 EG--SCQPCPA-------NSHSNTIGSAVCQCRVGYFR 310
>gi|40217843 cartilage oligomeric matrix protein precursor [Homo
sapiens]
Length = 757
Score = 38.1 bits (87), Expect = 0.017
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 130 ELCPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEE---RSPCTTTRNT 186
E CPPG H +GVG A N C C++ + S C TR +
Sbjct: 152 EACPPGYSGPTH--------QGVGLAFAKANKQVCTDINECETGQHNCVPNSVCINTRGS 203
Query: 187 --ACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGN 236
C+PG F D ++ R+ R CP G +C +D CV + G+
Sbjct: 204 FQCGPCQPG-FVGDQASGCQRRAQRFCPDG--SPSECHEHAD--CVLERDGS 250
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 37.7 bits (86), Expect = 0.023
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 42/191 (21%)
Query: 85 RLRVHKTFKFVVVGVLLQVVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGA 144
R VH + + V + LQ S A+ + L D + Q+ +S
Sbjct: 1112 RSTVHASRESNAVVISLQTTFSLASNVTLFDLADRMQKCVNS------------------ 1153
Query: 145 CNRCTEGVGYTNASNNLFACLPCTACKSDE--EERSPCTTTRNTA-CQCKPGTFRNDNSA 201
C E + +F KS E ++ S CT A CQCK G F+ +
Sbjct: 1154 CKSSAEVCQLLGSQRRIFRAGSLCKRKSPECDKDTSICTDLDGVALCQCKSGYFQFNKMD 1213
Query: 202 EMCRKCSRG----------CPRGMVKVKDCTPWSDIECVHKESGNGHNIWVILVVTLVVP 251
CR C G CP G+ + P+ I V +G G ++
Sbjct: 1214 HSCRACEDGYRLENETCMSCPFGLGGLNCGNPYQLITVVIAAAGGG-----------LLL 1262
Query: 252 LLLVAVLIVCC 262
+L +A+++ CC
Sbjct: 1263 ILGIALIVTCC 1273
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 37.4 bits (85), Expect = 0.029
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 33/134 (24%)
Query: 132 CPPGSHRSEHPGACNRCTEGVGYTNASNNLFACLPCT-ACKSDEEERSPCTTTRNTACQ- 189
CP GSH + +C RC C P T +C+S E + T CQ
Sbjct: 252 CPAGSHGVQCAHSCGRCKHNE----------PCSPDTGSCESCEPGWN------GTQCQQ 295
Query: 190 -CKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIECVHKESGNGHNIWVILVVTL 248
C PGTF ++ + C C G + C P D + SG+ L+
Sbjct: 296 PCLPGTF-GESCEQQCPHCRHG--------EACEP--DTGHCQRCSGSRD---TALIAGS 341
Query: 249 VVPLLLVAVLIVCC 262
+VPLLL+ + + CC
Sbjct: 342 LVPLLLLFLGLACC 355
Score = 29.6 bits (65), Expect = 6.1
Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 18/102 (17%)
Query: 123 WEHSPLG-ELCPPGSHR--SEHPGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSP 179
W G EL P G H + P A +C G + + C AC+ DE
Sbjct: 13 WTRGTQGSELDPKGQHVCVASSPSAELQCCAGWRQKDQECTIPICEGPDACQKDE----- 67
Query: 180 CTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDC 221
+ C+CKPG F CS CP G DC
Sbjct: 68 -VCVKPGLCRCKPGFFG--------AHCSSRCP-GQYWGPDC 99
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,889,987
Number of Sequences: 37866
Number of extensions: 1138730
Number of successful extensions: 5903
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 5611
Number of HSP's gapped (non-prelim): 459
length of query: 468
length of database: 18,247,518
effective HSP length: 106
effective length of query: 362
effective length of database: 14,233,722
effective search space: 5152607364
effective search space used: 5152607364
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.