COMP 27353

Name: COMP	Sequence: fasta or formatted (757aa)		NCBI GI: 40217843
Description: cartilage oligomeric matrix protein precursor		Referenced in: Bone and Related Tissues Platelets and Megakaryocytes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 47 2 C cysteine 6.1 46 1 D aspartate 12.9 98 5 E glutamate 4.5 34 1 F phenylalanine 3.4 26 1 G glycine 9.4 71 2 H histidine 1.8 14 1 I isoleucine 2.5 19 2 K lysine 2.6 20 2 L leucine 5.0 38 3 M methionine 1.1 8 1 N asparagine 5.7 43 1 P proline 6.2 47 2 Q glutamine 6.7 51 2 R arginine 6.2 47 2 S serine 4.8 36 3 T threonine 4.6 35 2 V valine 7.4 56 2 W tryptophan 1.3 10 1 Y tyrosine 1.5 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cartilage oligomeric matrix protein precursor THBS4 0.689 thrombospondin 4 precursor THBS3 0.635 thrombospondin 3 precursor THBS2 0.451 thrombospondin 2 precursor THBS1 0.449 thrombospondin 1 precursor FBN1 0.054 fibrillin 1 precursor LTBP4 0.047 latent transforming growth factor beta binding prot... LTBP4 0.047 latent transforming growth factor beta binding prot... LTBP4 0.047 latent transforming growth factor beta binding prot... CUBN 0.044 cubilin NID1 0.040 nidogen 1 precursor FBN2 0.038 fibrillin 2 precursor STAB1 0.037 stabilin 1 precursor EGF 0.037 epidermal growth factor (beta-urogastrone) NELL1 0.037 nel-like 1 isoform 2 precursor NELL1 0.037 nel-like 1 isoform 1 precursor LTBP2 0.037 latent transforming growth factor beta binding protei... FBN3 0.037 fibrillin 3 precursor NID2 0.036 nidogen 2 precursor HMCN1 0.035 hemicentin 1 FBLN1 0.035 fibulin 1 isoform B precursor FBLN1 0.035 fibulin 1 isoform A precursor FBLN1 0.035 fibulin 1 isoform D FBLN1 0.035 fibulin 1 isoform C precursor NOTCH3 0.035 Notch homolog 3 UMOD 0.034 uromodulin precursor UMOD 0.034 uromodulin precursor FBLN2 0.034 fibulin 2 isoform b precursor FBLN2 0.034 fibulin 2 isoform a precursor EMR1 0.034 egf-like module containing, mucin-like, hormone rece... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.