| Name: LOC100291777 | Sequence: fasta or formatted (1662aa) | NCBI GI: 239755390 | |
|
Description: PREDICTED: similar to DMBT1 isoform 1
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {1788aa} PREDICTED: similar to DMBT1 isoform 2 | |||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.9 98 2 C cysteine 5.0 83 1 D aspartate 6.3 104 2 E glutamate 3.9 64 3 F phenylalanine 2.7 45 1 G glycine 10.0 166 2 H histidine 2.6 44 2 I isoleucine 3.5 59 2 K lysine 0.6 10 1 L leucine 7.3 121 3 M methionine 0.8 14 1 N asparagine 5.3 88 2 P proline 5.1 85 2 Q glutamine 3.1 52 1 R arginine 6.2 103 2 S serine 11.8 196 3 T threonine 6.1 102 5 V valine 6.9 115 2 W tryptophan 3.3 55 2 Y tyrosine 3.5 58 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to DMBT1 isoform 1 DMBT1 0.901 deleted in malignant brain tumors 1 isoform c precu... DMBT1 0.901 deleted in malignant brain tumors 1 isoform b precu... DMBT1 0.894 deleted in malignant brain tumors 1 isoform a precu... LOC100291777 0.893 PREDICTED: similar to DMBT1 isoform 2 CD163L1 0.205 scavenger receptor cysteine-rich type 1 precursor [H... CD163 0.198 CD163 antigen isoform b CD163 0.198 CD163 antigen isoform a SRCRB4D 0.138 scavenger receptor cysteine rich domain containing, ... LOC284297 0.131 hypothetical protein LOC284297 LOC651581 0.129 PREDICTED: hypothetical protein PRSS12 0.094 neurotrypsin precursor CUZD1 0.077 CUB and zona pellucida-like domains 1 CD5L 0.069 CD5 molecule-like LOXL4 0.069 lysyl oxidase-like 4 precursor LOXL3 0.068 lysyl oxidase-like 3 precursor LOXL2 0.066 lysyl oxidase-like 2 precursor CD6 0.061 CD6 molecule TLL1 0.036 tolloid-like 1 TLL2 0.034 tolloid-like 2 BMP1 0.032 bone morphogenetic protein 1 isoform 1 precursor [Hom... BMP1 0.032 bone morphogenetic protein 1 isoform 2 precursor [Hom... BMP1 0.032 bone morphogenetic protein 1 isoform 3 precursor [Hom... CDCP2 0.031 CUB domain containing protein 2 LGALS3BP 0.031 galectin 3 binding protein CUBN 0.028 cubilin HHIPL1 0.028 HHIP-like protein 1 isoform a SCARA5 0.025 scavenger receptor class A, member 5 MARCO 0.024 macrophage receptor with collagenous structure MSR1 0.023 macrophage scavenger receptor 1 isoform type 1 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
