Guide to the Human Genome
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Name: LGALS3BP Sequence: fasta or formatted (585aa) NCBI GI: 5031863
Description:

galectin 3 binding protein

Referenced in:

Lectin Families
Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         48           2
 C cysteine            2.7         16           1
 D aspartate           5.6         33           1
 E glutamate           5.3         31           2
 F phenylalanine       5.1         30           1
 G glycine             6.5         38           2
 H histidine           1.5          9           1
 I isoleucine          2.4         14           1
 K lysine              3.2         19           2
 L leucine            12.3         72           3
 M methionine          1.5          9           2
 N asparagine          2.9         17           1
 P proline             4.8         28           2
 Q glutamine           5.0         29           1
 R arginine            5.0         29           2
 S serine              9.2         54           2
 T threonine           6.2         36           1
 V valine              6.0         35           2
 W tryptophan          2.7         16           1
 Y tyrosine            3.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin 3 binding protein 
DMBT1                 0.095   deleted in malignant brain tumors 1 isoform c precu...
CD163                 0.094   CD163 antigen isoform b 
CD163                 0.094   CD163 antigen isoform a 
LOC100291777          0.093   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.093   deleted in malignant brain tumors 1 isoform b precu...
LOC100291777          0.093   PREDICTED: similar to DMBT1 isoform 1 
DMBT1                 0.093   deleted in malignant brain tumors 1 isoform a precu...
LOC651581             0.092   PREDICTED: hypothetical protein 
PRSS12                0.086   neurotrypsin precursor 
BTBD17                0.082   BTB (POZ) domain containing 17 
CD163L1               0.081   scavenger receptor cysteine-rich type 1 precursor [H...
LOC284297             0.077   hypothetical protein LOC284297 
SRCRB4D               0.077   scavenger receptor cysteine rich domain containing, ...
HHIPL1                0.077   HHIP-like protein 1 isoform a 
LOXL4                 0.075   lysyl oxidase-like 4 precursor 
LOXL2                 0.074   lysyl oxidase-like 2 precursor 
MSR1                  0.070   macrophage scavenger receptor 1 isoform type 1 [Homo...
SCARA5                0.066   scavenger receptor class A, member 5 
CD6                   0.065   CD6 molecule 
MARCO                 0.065   macrophage receptor with collagenous structure 
LOXL3                 0.064   lysyl oxidase-like 3 precursor 
CD5L                  0.051   CD5 molecule-like 
KLHL5                 0.025   kelch-like 5 isoform 3 
KLHL5                 0.025   kelch-like 5 isoform 2 
KLHL5                 0.025   kelch-like 5 isoform 1 
MSR1                  0.020   macrophage scavenger receptor 1 isoform type 3 [Homo...
KBTBD3                0.018   BTB and kelch domain containing 3 
KBTBD3                0.018   BTB and kelch domain containing 3 
BTBD2                 0.016   BTB (POZ) domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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