Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DMKN Sequence: fasta or formatted (386aa) NCBI GI: 186928829
Description:

dermokine isoform 4 precursor

Referenced in:

Skin and Related Tissues

Other entries for this name:
alt prot [416aa] dermokine isoform 3 precursor
alt prot [398aa] dermokine isoform 5 precursor
alt prot [189aa] dermokine isoform 6
alt prot [137aa] dermokine isoform 7
alt prot [476aa] dermokine isoform 2 precursor
alt prot [90aa] dermokine isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         28           2
 C cysteine            1.0          4           1
 D aspartate           2.3          9           1
 E glutamate           4.7         18           2
 F phenylalanine       2.6         10           1
 G glycine            26.7        103           3
 H histidine           2.3          9           1
 I isoleucine          2.3          9           1
 K lysine              2.6         10           1
 L leucine             4.1         16           3
 M methionine          0.8          3           1
 N asparagine          7.0         27           3
 P proline             4.9         19           3
 Q glutamine           4.4         17           1
 R arginine            2.8         11           1
 S serine             15.3         59           3
 T threonine           3.4         13           1
 V valine              3.1         12           1
 W tryptophan          1.8          7           1
 Y tyrosine            0.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dermokine isoform 4 precursor 
DMKN                  0.988   dermokine isoform 5 precursor 
DMKN                  0.983   dermokine isoform 2 precursor 
DMKN                  0.980   dermokine isoform 3 precursor 
DMKN                  0.174   dermokine isoform 6 
HRNR                  0.101   hornerin 
KRT9                  0.100   keratin 9 
LOR                   0.097   loricrin 
FUS                   0.085   fusion (involved in t(12;16) in malignant liposarcoma...
KRT10                 0.085   keratin 10 
FLG2                  0.082   filaggrin family member 2 
KRT1                  0.081   keratin 1 
COL3A1                0.079   collagen type III alpha 1 preproprotein 
TAF15                 0.072   TBP-associated factor 15 isoform 2 
TAF15                 0.072   TBP-associated factor 15 isoform 1 
KRT2                  0.072   keratin 2 
HNRNPA3               0.070   heterogeneous nuclear ribonucleoprotein A3 
COL5A3                0.068   collagen, type V, alpha 3 preproprotein 
IRS4                  0.068   insulin receptor substrate 4 
COL1A1                0.065   alpha 1 type I collagen preproprotein 
HNRNPA1               0.064   heterogeneous nuclear ribonucleoprotein A1 isoform b...
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.063   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
ILF3                  0.063   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.063   interleukin enhancer binding factor 3 isoform a [Hom...
PPP1R10               0.061   protein phosphatase 1, regulatory subunit 10 
COL1A2                0.061   alpha 2 type I collagen 
LOC100293055          0.060   PREDICTED: similar to COL22A1 protein 
KRTAP5-4              0.060   keratin associated protein 5-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press