Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DMKN Sequence: fasta or formatted (189aa) NCBI GI: 186928831
Description:

dermokine isoform 6

Referenced in:

Skin and Related Tissues

Other entries for this name:
alt prot [416aa] dermokine isoform 3 precursor
alt prot [398aa] dermokine isoform 5 precursor
alt prot [386aa] dermokine isoform 4 precursor
alt prot [137aa] dermokine isoform 7
alt prot [476aa] dermokine isoform 2 precursor
alt prot [90aa] dermokine isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         13           1
 C cysteine            1.1          2           1
 D aspartate           3.2          6           1
 E glutamate           4.8          9           1
 F phenylalanine       4.8          9           1
 G glycine            13.8         26           3
 H histidine           1.6          3           1
 I isoleucine          3.2          6           2
 K lysine              7.4         14           1
 L leucine             5.3         10           2
 M methionine          1.1          2           1
 N asparagine          7.4         14           1
 P proline             5.8         11           3
 Q glutamine           5.3         10           2
 R arginine            3.2          6           1
 S serine             12.2         23           3
 T threonine           4.2          8           1
 V valine              2.6          5           1
 W tryptophan          3.2          6           1
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dermokine isoform 6 
DMKN                  0.899   dermokine isoform 2 precursor 
DMKN                  0.609   dermokine isoform 7 
DMKN                  0.362   dermokine isoform 4 precursor 
DMKN                  0.338   dermokine isoform 5 precursor 
DMKN                  0.319   dermokine isoform 3 precursor 
DMKN                  0.290   dermokine isoform 1 precursor 
IRS4                  0.032   insulin receptor substrate 4 
PER1                  0.027   period 1 
KRT9                  0.027   keratin 9 
KRT1                  0.027   keratin 1 
HRNR                  0.024   hornerin 
FAM120A               0.024   oxidative stress-associated Src activator 
FBL                   0.021   fibrillarin 
PRR12                 0.021   proline rich 12 
WTIP                  0.021   Wilms tumor 1 interacting protein 
HNRNPA1               0.021   heterogeneous nuclear ribonucleoprotein A1 isoform b...
EVX2                  0.021   even-skipped homeobox 2 
ONECUT2               0.021   one cut domain, family member 2 
ZFC3H1                0.021   proline/serine-rich coiled-coil 2 
KRTAP5-7              0.021   keratin associated protein 5-7 
KRTAP5-2              0.021   keratin associated protein 5-2 
ZIC2                  0.019   zinc finger protein of the cerebellum 2 
GSK3A                 0.019   glycogen synthase kinase 3 alpha 
KRTAP5-5              0.019   keratin associated protein 5-5 
CHD1                  0.019   chromodomain helicase DNA binding protein 1 
KRTAP5-4              0.019   keratin associated protein 5-4 
RFX1                  0.019   regulatory factor X1 
LOC100292082          0.019   PREDICTED: hypothetical protein XP_002345881 
RBM15                 0.019   RNA binding motif protein 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press