Guide to the Human Genome
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Name: DMKN Sequence: fasta or formatted (137aa) NCBI GI: 186928833
Description:

dermokine isoform 7

Referenced in:

Skin and Related Tissues

Other entries for this name:
alt prot [416aa] dermokine isoform 3 precursor
alt prot [398aa] dermokine isoform 5 precursor
alt prot [386aa] dermokine isoform 4 precursor
alt prot [189aa] dermokine isoform 6
alt prot [476aa] dermokine isoform 2 precursor
alt prot [90aa] dermokine isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         14           2
 C cysteine            0.0          0           0
 D aspartate           3.6          5           1
 E glutamate           2.2          3           1
 F phenylalanine       6.6          9           1
 G glycine             7.3         10           2
 H histidine           0.7          1           1
 I isoleucine          2.9          4           2
 K lysine              8.8         12           1
 L leucine             5.8          8           2
 M methionine          0.7          1           1
 N asparagine          7.3         10           1
 P proline             6.6          9           3
 Q glutamine           5.8          8           1
 R arginine            3.6          5           1
 S serine              8.8         12           3
 T threonine           4.4          6           1
 V valine              5.1          7           1
 W tryptophan          5.1          7           1
 Y tyrosine            4.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dermokine isoform 7 
DMKN                  0.854   dermokine isoform 6 
DMKN                  0.854   dermokine isoform 2 precursor 
DMKN                  0.373   dermokine isoform 1 precursor 
DMKN                  0.138   dermokine isoform 4 precursor 
DMKN                  0.138   dermokine isoform 5 precursor 
DMKN                  0.138   dermokine isoform 3 precursor 
SEC24A                0.019   SEC24 related gene family, member A 
SHE                   0.011   Src homology 2 domain containing E 
HOXD3                 0.011   homeobox D3 
EEPD1                 0.011   endonuclease/exonuclease/phosphatase family domain c...
HR                    0.007   hairless protein isoform a 
HR                    0.007   hairless protein isoform b 
SLC17A4               0.007   solute carrier family 17 (sodium phosphate), member 4...
KRTDAP                0.007   keratinocyte differentiation-associated protein [Hom...
EWSR1                 0.004   Ewing sarcoma breakpoint region 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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