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Search of human proteins with 18643383
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo
sapiens]
(683 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens] 1439 0.0
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 417 e-116
gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens] 389 e-108
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 44 6e-04
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ... 42 0.002
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ... 42 0.002
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 42 0.002
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 40 0.009
gi|91208420 bassoon protein [Homo sapiens] 40 0.009
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 40 0.009
gi|74271888 lipin 3 [Homo sapiens] 40 0.009
gi|158534059 formin binding protein 4 [Homo sapiens] 40 0.009
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 39 0.012
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 39 0.012
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 39 0.016
gi|142976757 immediate early response 5 [Homo sapiens] 39 0.021
gi|9966841 cell death regulator aven [Homo sapiens] 39 0.021
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 39 0.021
gi|19924097 synapsin I isoform Ib [Homo sapiens] 39 0.021
gi|30795231 brain abundant, membrane attached signal protein 1 [... 38 0.035
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.035
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.035
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 38 0.035
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 38 0.035
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 38 0.035
gi|13129104 coiled-coil domain containing 86 [Homo sapiens] 37 0.046
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 37 0.060
gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens] 37 0.060
>gi|18643383 inositol 1,4,5-trisphosphate 3-kinase C [Homo sapiens]
Length = 683
Score = 1439 bits (3725), Expect = 0.0
Identities = 683/683 (100%), Positives = 683/683 (100%)
Query: 1 MRRCPCRGSLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWA 60
MRRCPCRGSLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWA
Sbjct: 1 MRRCPCRGSLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWA 60
Query: 61 RTEGSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSL 120
RTEGSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSL
Sbjct: 61 RTEGSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSL 120
Query: 121 RTHLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHG 180
RTHLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHG
Sbjct: 121 RTHLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHG 180
Query: 181 SQTQPERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGP 240
SQTQPERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGP
Sbjct: 181 SQTQPERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGP 240
Query: 241 WTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPED 300
WTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPED
Sbjct: 241 WTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPED 300
Query: 301 GPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSA 360
GPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSA
Sbjct: 301 GPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSA 360
Query: 361 SSFDESEDDVVAGGGGASDPEDRSGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGN 420
SSFDESEDDVVAGGGGASDPEDRSGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGN
Sbjct: 361 SSFDESEDDVVAGGGGASDPEDRSGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGN 420
Query: 421 FQAGEDGRILKRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGP 480
FQAGEDGRILKRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGP
Sbjct: 421 FQAGEDGRILKRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGP 480
Query: 481 SIMDCKMGSRTYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQW 540
SIMDCKMGSRTYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQW
Sbjct: 481 SIMDCKMGSRTYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQW 540
Query: 541 RETMSSTSTLGFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLE 600
RETMSSTSTLGFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLE
Sbjct: 541 RETMSSTSTLGFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLE 600
Query: 601 ELREALEISPFFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEG 660
ELREALEISPFFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEG
Sbjct: 601 ELREALEISPFFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEG 660
Query: 661 NREDGYLWGLDNMICLLQGLAQS 683
NREDGYLWGLDNMICLLQGLAQS
Sbjct: 661 NREDGYLWGLDNMICLLQGLAQS 683
>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
sapiens]
Length = 946
Score = 417 bits (1071), Expect = e-116
Identities = 219/432 (50%), Positives = 285/432 (65%), Gaps = 40/432 (9%)
Query: 273 TDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPVPRLII 332
++G+W D S P + L +P+ L + CSP +P +II
Sbjct: 528 SEGTWESQRQD-SDALPSPELLPQDPDKPFLRKA--------------CSP-SNIPAVII 571
Query: 333 TPETPEPEAQ------------PVGPPSRVEGGSGGFSSASSFDESEDDVVAGGGGASDP 380
T + + P+ S S GFSS S+++SE+D+ + DP
Sbjct: 572 TDMGTQEDGALEETQGSPRGNLPLRKLSSSSASSTGFSS--SYEDSEEDISSDPERTLDP 629
Query: 381 EDR----------SGSKPWKKLKTVLKYSPFVVSFRKHYPWVQLSGHAGNFQAGEDGRIL 430
SK W+K+K ++ +SPFV+SF+K YPW+QL+GHAG+F+A +GRIL
Sbjct: 630 NSAFLHTLDQQKPRVSKSWRKIKNMVHWSPFVMSFKKKYPWIQLAGHAGSFKAAANGRIL 689
Query: 431 KRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSIMDCKMGSR 490
K+ C+ EQR L++LM D LRPFVPAY+G V++DG+ +NQM+DLLADF+ P +MDCKMG R
Sbjct: 690 KKHCESEQRCLDRLMVDVLRPFVPAYHGDVVKDGERYNQMDDLLADFDSPCVMDCKMGIR 749
Query: 491 TYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRETMSSTSTL 550
TYLEEEL KAR++P RKDMY+KM+ VDP APT EE AQ AVTKPRYMQWRET+SST+TL
Sbjct: 750 TYLEEELTKARKKPSLRKDMYQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETISSTATL 809
Query: 551 GFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVILQKYVACLEELREALEISP 610
GFRIEGIKK DGT N +FKKT+ EQVT+ +F G+H IL Y L+ +R LE+SP
Sbjct: 810 GFRIEGIKKEDGTVNRDFKKTKTREQVTEAFREFTKGNHNILIAYRDRLKAIRTTLEVSP 869
Query: 611 FFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLSHRLPWAEGNREDGYLWGL 670
FFK HEV+GSSLLF+HD AKVWMIDFGKT LP+ QTL H +PW EGNREDGYL GL
Sbjct: 870 FFKCHEVIGSSLLFIHDKKEQAKVWMIDFGKTTPLPEGQTLQHDVPWQEGNREDGYLSGL 929
Query: 671 DNMICLLQGLAQ 682
+N++ +L ++Q
Sbjct: 930 NNLVDILTEMSQ 941
>gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens]
Length = 461
Score = 389 bits (998), Expect = e-108
Identities = 201/390 (51%), Positives = 265/390 (67%), Gaps = 28/390 (7%)
Query: 320 KCSPLCPVPRLIITPETPEPEAQPVGPPSR------VEGGS-------------GGFSSA 360
+ P +P+L +T E P+ GPP R G S S+
Sbjct: 72 RAPPAPVIPQLTVTAEEPDVPPTSPGPPERERDCLPAAGSSHLQQPRRLSTSSVSSTGSS 131
Query: 361 SSFDESEDDVVAGGGGASDP-------EDRSGSKPWKKLKTVLKYSPFVVSFRKHYPWVQ 413
S ++SEDD+++ S ED W+K++T++ P + F+K Y WVQ
Sbjct: 132 SLLEDSEDDLLSDSESRSRGNVQLEAGEDVGQKNHWQKIRTMVNL-PVISPFKKRYAWVQ 190
Query: 414 LSGHAGNFQA-GEDGRILKRFCQCEQRSLEQLMKDPLRPFVPAYYGMVLQDGQTFNQMED 472
L+GH G+F+A G G ILKR + E+ L +LM D LR VPA++G+V +DG+++ Q++D
Sbjct: 191 LAGHTGSFKAAGTSGLILKRCSEPERYCLARLMADALRGCVPAFHGVVERDGESYLQLQD 250
Query: 473 LLADFEGPSIMDCKMGSRTYLEEELVKARERPRPRKDMYEKMVAVDPGAPTPEEHAQGAV 532
LL F+GP ++DCKMG RTYLEEEL KARERP+ RKDMY+KM+AVDP APT EEHAQ AV
Sbjct: 251 LLDGFDGPCVLDCKMGVRTYLEEELTKARERPKLRKDMYKKMLAVDPEAPTEEEHAQRAV 310
Query: 533 TKPRYMQWRETMSSTSTLGFRIEGIKKADGTCNTNFKKTQALEQVTKVLEDFVDGDHVIL 592
TKPRYMQWRE +SS++TLGFRIEGIKKADG+C+T+FK T++ EQV +V E+FV GD +L
Sbjct: 311 TKPRYMQWREGISSSTTLGFRIEGIKKADGSCSTDFKTTRSREQVLRVFEEFVQGDEEVL 370
Query: 593 QKYVACLEELREALEISPFFKTHEVVGSSLLFVHDHTGLAKVWMIDFGKTVALPDHQTLS 652
++Y+ L+++R+ LE+S FF+ HEV+GSSLLFVHDH A VW+IDFGKT LPD Q L
Sbjct: 371 RRYLNRLQQIRDTLEVSEFFRRHEVIGSSLLFVHDHCHRAGVWLIDFGKTTPLPDGQILD 430
Query: 653 HRLPWAEGNREDGYLWGLDNMICLLQGLAQ 682
HR PW EGNREDGYL GLDN+I +L LA+
Sbjct: 431 HRRPWEEGNREDGYLLGLDNLIGILASLAE 460
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 43.5 bits (101), Expect = 6e-04
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 19 PAAARMGLEAPRGGRRRQ-PGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAGLG 77
P A + L AP GG Q PG P PGA A +GG W+ L P G
Sbjct: 34 PGPAELRLGAPVGGPDPQSPGLDEPAPGAAA-----DGGARWSAGPAPGLEGGPRDPGPS 88
Query: 78 PAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEWSWSELETTC 135
P P+ + P A G G +E P + +P +SW+E C
Sbjct: 89 APPPRSGPRGQL-----ASPDAPGPGPRSEAPLPELDP---------LFSWTEEPEEC 132
>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 576
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 30 RGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAG-LGPAP-GTESPQA 87
R G PG +R GAG AG P GGP T ++ + P+ AG P P G QA
Sbjct: 267 RAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQA 326
Query: 88 EFWTDGQTEPAAAGLGVETE----RPKQKTEP-----DRSSLRTH 123
E TD +T + E RPK + P D S TH
Sbjct: 327 EIETDPETGSDSFSTWTSYEFNYARPKSHSSPLSTSRDPKSSYTH 371
>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
sapiens]
Length = 404
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 30 RGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAG-LGPAP-GTESPQA 87
R G PG +R GAG AG P GGP T ++ + P+ AG P P G QA
Sbjct: 267 RAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQA 326
Query: 88 EFWTDGQTEPAAAGLGVETE----RPKQKTEP-----DRSSLRTH 123
E TD +T + E RPK + P D S TH
Sbjct: 327 EIETDPETGSDSFSTWTSYEFNYARPKSHSSPLSTSRDPKSSYTH 371
>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
sapiens]
Length = 404
Score = 41.6 bits (96), Expect = 0.002
Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 30 RGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAG-LGPAP-GTESPQA 87
R G PG +R GAG AG P GGP T ++ + P+ AG P P G QA
Sbjct: 267 RAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARPDAAGEQCPRPAGARPRQA 326
Query: 88 EFWTDGQTEPAAAGLGVETE----RPKQKTEP-----DRSSLRTH 123
E TD +T + E RPK + P D S TH
Sbjct: 327 EIETDPETGSDSFSTWTSYEFNYARPKSHSSPLSTSRDPKSSYTH 371
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 41.6 bits (96), Expect = 0.002
Identities = 79/322 (24%), Positives = 98/322 (30%), Gaps = 56/322 (17%)
Query: 16 GALPAA-ARMGLEAPRG--GRRRQPGQQ-------RPGPGAGAPAGRPEGGGPWARTEGS 65
G LP GL P+G G PG Q PGP P G P GP R +
Sbjct: 1207 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPT 1266
Query: 66 SLHSEPERAGLGPAPGTESPQAEFWTDGQTE-PAAAGLGVETERPKQKTEPDRSSLRTHL 124
P G PG + E GQ P GL + P + P R L
Sbjct: 1267 GFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG-- 1324
Query: 125 EWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHGSQTQ 184
+ + G G+ P P A P +PG+ GP G Q
Sbjct: 1325 -----------MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQ 1373
Query: 185 PERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGPWTEP 244
+K A P G +P G G + Q + GP P
Sbjct: 1374 SIIIKGDAG--------------PPGI--PGQPGLKG------LPGPQGPQGLPGPTGPP 1411
Query: 245 YTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLE 304
G PG G ++ G QP T G PG D L G P
Sbjct: 1412 GDPGRNGL---------PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1462
Query: 305 EPEPGELLTHLYSHLKCSPLCP 326
G L+T +S +P CP
Sbjct: 1463 SVAHGFLITR-HSQTTDAPQCP 1483
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 16 GALPAAARMGLEAPRG-----GRRRQPGQQRPGPGAGAPAGRP--EGG-GPWARTEGSSL 67
GA R+GLE P G G + +PG PGP P G P +G GP
Sbjct: 725 GAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP--PGPPGLPGFKGALGPKGDRGFPGP 782
Query: 68 HSEPERAGLGPAPGTESPQAEFWTDGQT----EPAAAGLGVE 105
P R GL PG P+ + +GQ P G+GV+
Sbjct: 783 PGPPGRTGLDGLPG---PKGDVGPNGQPGPMGPPGLPGIGVQ 821
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 41.2 bits (95), Expect = 0.003
Identities = 49/252 (19%), Positives = 79/252 (31%), Gaps = 28/252 (11%)
Query: 45 GAGAPA--GRPEGGGPWARTEGSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGL 102
GA P+ G WA T S + P + P+ S A G + P+ +G
Sbjct: 138 GASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSAS----GASTPSDSGW 193
Query: 103 GVETERPKQKTEPDRSSLRTHLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEAS 162
S SW+ + W T +D W S + AS
Sbjct: 194 A------------SPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGAS 241
Query: 163 PWTQPGVHGPWTELETHGSQTQPERVKSWADNLWTHQNSS--SLQTHPEGACPSKE-PSA 219
+ G W T R + +D+ W ++S S+ + CPS S+
Sbjct: 242 TSSDSG----WASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDSGWVCPSASWASS 297
Query: 220 DGSWKELYTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQ---IQQDTDGS 276
SW +D + + T + + +A G + +D
Sbjct: 298 SASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSG 357
Query: 277 WTQPSTDGSQTA 288
W PS G+ T+
Sbjct: 358 WASPSASGASTS 369
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 39.7 bits (91), Expect = 0.009
Identities = 90/361 (24%), Positives = 118/361 (32%), Gaps = 50/361 (13%)
Query: 12 EAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEP 71
+ E G A+ R G + P+G +R PG P G P GP P
Sbjct: 1856 KGEKGDSGASGREGRDGPKG--------ERGAPGILGPQGPPGLPGPVG----------P 1897
Query: 72 ERAGLGPAPGTESPQAEFWTDG----QTEPAAAGLGVE------TERPKQKTEPDRSSLR 121
G PG P+ + G Q P GL E +R + S+LR
Sbjct: 1898 PGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALR 1957
Query: 122 THLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHGS 181
+E +W E + L G D S Q P + P PG G + G
Sbjct: 1958 EIVE-TWDESSGSFLPVPERRRGPKGD---SGEQGPPGKEGPIGFPGERGLKGDRGDPGP 2013
Query: 182 QTQP-----ERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQD 236
Q P ER L + P A E G E G R +Q
Sbjct: 2014 QGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQG 2073
Query: 237 IEGPWTEPYTDGSQKKQDTEAARKQPGTG--GFQIQQDTDGSWTQPSTDGSQTAPGTDCL 294
+GP P T G + + +PG G G Q G+ +P ++G Q G +
Sbjct: 2074 RDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGV 2133
Query: 295 LGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGS 354
G D EPG +P P R + PE P GPP V GG
Sbjct: 2134 PGIKGD----RGEPGP------RGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPV-GGH 2182
Query: 355 G 355
G
Sbjct: 2183 G 2183
Score = 38.5 bits (88), Expect = 0.021
Identities = 97/404 (24%), Positives = 128/404 (31%), Gaps = 49/404 (12%)
Query: 7 RGSLNEAEAGALPAAA-RMGLEAPRG-----GRRRQPGQQ-RPG------PGAGAPAGRP 53
RG A + LP A R G + P G GR+ + G+ RPG P P G
Sbjct: 1497 RGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEK 1556
Query: 54 EGGGPWARTEGSSLHSEPERAGLGPAPGTESPQAEFWTDGQTE-PAAAGLGVETERPKQK 112
GP + + E GL PG P+ + G AG ++ P +K
Sbjct: 1557 GDVGPAGPRGATGVQGERGPPGL-VLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEK 1615
Query: 113 TEPDRSSLRTHLEWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGP 172
+P R + + E E G +G DP L + E PGV GP
Sbjct: 1616 GDPGRPGPPGPVGPRGRDGEVG----EKGDEGPPGDP---GLPGKAGERGLRGAPGVRGP 1668
Query: 173 WTELETHGSQTQPERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSR 232
E G + R S + P G P A +E G R
Sbjct: 1669 VGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGA----REKGEPGDR 1724
Query: 233 TQQDIEGPWTEPYTDGSQKKQDTEAARKQP---GTGGFQIQQDTDGSWTQPSTDGSQTAP 289
Q+ GP +P G+ ++ E R P G G + G P DG
Sbjct: 1725 GQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLD 1784
Query: 290 GTDCLLGE--PEDGPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPP 347
G G P + +PG +P L P P P P
Sbjct: 1785 GKPGAAGPSGPNGAAGKAGDPGR--------------DGLPGLRGEQGLPGPSGPPGLPG 1830
Query: 348 SRVEGGSGGFS--SASSFDESEDDVVA--GGGGASDPEDRSGSK 387
E G G + + D ED G GAS E R G K
Sbjct: 1831 KPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPK 1874
Score = 30.8 bits (68), Expect = 4.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 248 GSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEP-EDGPLEEP 306
G + Q + R PG GGF DGS P GS G + L G+ E GP
Sbjct: 2692 GPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGP---- 2747
Query: 307 EPGE 310
PGE
Sbjct: 2748 -PGE 2750
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 39.7 bits (91), Expect = 0.009
Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 29 PRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAGLGPAPG 81
P GG PG PGPGAG P P GGG + + P G GP PG
Sbjct: 17 PPGGAGPGPGPG-PGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPG 68
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 39.7 bits (91), Expect = 0.009
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 4/97 (4%)
Query: 19 PAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAGL-- 76
PA+A P + P Q P PG A GGG + T S + P L
Sbjct: 536 PASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPS 595
Query: 77 --GPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQ 111
GP P E P + EP G+G + P Q
Sbjct: 596 KEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQ 632
Score = 29.6 bits (65), Expect = 9.6
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 28/109 (25%)
Query: 19 PAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGG-------PWARTEGSSLHSEP 71
PA AR RGGR P G P+ R GGG P SL P
Sbjct: 1148 PAPARF---TARGGRVFTP--------RGVPSRRGRGGGRPPPQVCPGWSPPAKSL--AP 1194
Query: 72 ERAGLGPAPGTESPQAEFWTDGQTEPAAAG-------LGVET-ERPKQK 112
++ GP P ++ P E G P A G +G+E ERP+++
Sbjct: 1195 KKPPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRR 1243
>gi|74271888 lipin 3 [Homo sapiens]
Length = 851
Score = 39.7 bits (91), Expect = 0.009
Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 8 GSLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSL 67
G+ +E E + A G R RRR+P Q+ + E G + L
Sbjct: 123 GTASEPEGLVMAGTASTGRRKRR--RRRKPKQKEDAVATDSSPEELEAGAESELSLPEKL 180
Query: 68 HSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTE-----PDRSSLR- 121
EP L + ++DG+ P A+ E PK +E P+ S LR
Sbjct: 181 RPEPPGVQLEEKSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRA 240
Query: 122 -THLEWSWSEL 131
+H++W+W L
Sbjct: 241 ESHMQWAWGRL 251
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 39.7 bits (91), Expect = 0.009
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 234 QQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDC 293
+Q E W P DG +++++++A + T Q +D G+ + ST+ S+T+ G+ C
Sbjct: 617 EQSGESQWEFP--DGEEEEEESQAQENRDETLAKQTLKDKTGTDSN-STESSETSTGSLC 673
Query: 294 ---LLGEPEDGPLEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRV 350
G+ L P T L S++ P+P + P P PE+ P PP
Sbjct: 674 KESFSGQVSSSSLMPLTP--FWTLLQSNVPVLQP-PLPLEMPPPPPPPPESPPPPPPPPP 730
Query: 351 EGGSGGFSSASSFDESEDDVVAGGGGASDP 380
G DE ++ A G P
Sbjct: 731 PAEDGEIQEVEMEDEGSEEPPAPGTEEDTP 760
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 39.3 bits (90), Expect = 0.012
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 213 PSKEPSADGSWKELYTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQIQQD 272
P P A G + DG R Q GP EP DG + + +PG G ++
Sbjct: 188 PPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPG---KKG 244
Query: 273 TDGSWTQPSTDGSQTAPGTDCLLGE--PEDGPLEEPEPG 309
DG+ +QP G + PG+ GE + P + EPG
Sbjct: 245 DDGTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPG 283
Score = 32.0 bits (71), Expect = 1.9
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 16 GALPAAARMGLEAPRG-----GRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSE 70
GA G + PRG G + +PGQ G P + E G P + + + S+
Sbjct: 193 GARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGT-PSQ 251
Query: 71 PERAGLGPAPGTESPQAEFWTDGQTEP 97
P G PG+ P+ E DG P
Sbjct: 252 PGPPGPKGEPGSMGPRGENGVDGAPGP 278
Score = 30.0 bits (66), Expect = 7.4
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 220 DGSWKELYTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQ 279
DG+ E G R + GP P G + + +PG GF + G ++
Sbjct: 435 DGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSE 494
Query: 280 PSTDGSQTAPGTDCLLGEP-EDGP--LEEPEP 308
G + PG + G+ E GP L++P P
Sbjct: 495 RGEKGERGVPGRKGVKGQKGEPGPPGLDQPCP 526
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 39.3 bits (90), Expect = 0.012
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 9/122 (7%)
Query: 9 SLNEAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLH 68
SL AL + R ++P G RR+PG PGP + + + P+ +A T +
Sbjct: 459 SLLSLRPSALDSGPRGARDSPPGSPRRRPG---PGPRSASASLLPDA---FALT---AFE 509
Query: 69 SEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEWSW 128
EP+ P P +P A D P + P+ SLR L SW
Sbjct: 510 CEPQALRRPPGPFPAAPAAPDGADPGEAPTPPSSAQRSPGPRPSAHSHAGSLRPGLSASW 569
Query: 129 SE 130
E
Sbjct: 570 GE 571
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 38.9 bits (89), Expect = 0.016
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 30 RGGRRRQPGQQRPGPGAGAPAGR------PEGGGPWARTEGSSLHSEPERAGLGP 78
RG RR P +QRPGP A +P R GGGP A++ G P RAG P
Sbjct: 34 RGSWRRPPRRQRPGPAAPSPPARGAAAWGRSGGGPAAQSGGDG-GGLPRRAGAEP 87
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 38.5 bits (88), Expect = 0.021
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 32 GRRRQPGQQRPG-PGAGAPAGRPEGGGPWARTEGSSLHSEPERAGLGPAP--GTESPQA 87
G P QQ+PG P AG PAG E P AR +PER+ + AP G E P A
Sbjct: 62 GTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA 120
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 38.5 bits (88), Expect = 0.021
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 14/111 (12%)
Query: 30 RGGRRRQPGQQRPG-------PGA-------GAPAGRPEGGGPWARTEGSSLHSEPERAG 75
RGGR R+PG+ RPG PGA G G +GGG R G G
Sbjct: 8 RGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGGRG 67
Query: 76 LGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEW 126
G AP + W G + P ET + + + S + W
Sbjct: 68 GGGAPRGSRREPGGWGAGASAPVEDDSDAETYGEENDEQGNYSKRKIVSNW 118
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 38.5 bits (88), Expect = 0.021
Identities = 80/322 (24%), Positives = 98/322 (30%), Gaps = 59/322 (18%)
Query: 16 GALPAA-ARMGLEAPRG--GRRRQPGQQ-------RPGPGAGAPAGRPEGGGPWARTEGS 65
G LP GL P+G G PG Q PGP P G P GP R
Sbjct: 1207 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQ 1266
Query: 66 SLHSEPERAGLGPAPGTESPQAEFWTDGQTE-PAAAGLGVETERPKQKTEPDRSSLRTHL 124
L GL PG + E GQ P GL + P + P R L
Sbjct: 1267 GLPGPEGPPGL---PGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG-- 1321
Query: 125 EWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHGSQTQ 184
+ + G G+ P P A P +PG+ GP G Q
Sbjct: 1322 -----------MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQ 1370
Query: 185 PERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGPWTEP 244
+K A P G +P G G + Q + GP P
Sbjct: 1371 SIIIKGDAG--------------PPGI--PGQPGLKG------LPGPQGPQGLPGPTGPP 1408
Query: 245 YTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLE 304
G PG G ++ G QP T G PG D L G P
Sbjct: 1409 GDPGRNGL---------PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1459
Query: 305 EPEPGELLTHLYSHLKCSPLCP 326
G L+T +S +P CP
Sbjct: 1460 SVAHGFLITR-HSQTTDAPQCP 1480
Score = 32.7 bits (73), Expect = 1.1
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 16 GALPAAARMGLEAPRG-----GRRRQPGQQRPGPGAGAPAGRP--EGG-GPWARTEGSSL 67
GA R+GLE P G G + +PG PGP P G P +G GP
Sbjct: 725 GAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP--PGPPGLPGFKGALGPKGDRGFPGP 782
Query: 68 HSEPERAGLGPAPGTESPQAEFWTDGQT----EPAAAGLGVE 105
P R GL PG P+ + +GQ P G+GV+
Sbjct: 783 PGPPGRTGLDGLPG---PKGDVGPNGQPGPMGPPGLPGIGVQ 821
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 38.5 bits (88), Expect = 0.021
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 28 APRGGRRRQ-PGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEPERAGLGPAPGTESPQ 86
AP GG++RQ P Q+ PGP P + GP RT G +P +G GPA G PQ
Sbjct: 580 APPGGQQRQGPPQKPPGP--AGPTRQASQAGPVPRT-GPPTTQQPRPSGPGPA-GRPKPQ 635
Query: 87 AEFWTDGQTEPAAAGLGVETERPKQKTEP 115
P A P+ K P
Sbjct: 636 LAQKPSQDVPPPATAAAGGPPHPQLKASP 664
Score = 36.2 bits (82), Expect = 0.10
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 17/89 (19%)
Query: 5 PCRGSLNEAEA-GALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTE 63
P RGS + + GALP R + P G P QQRP P G P GP + +
Sbjct: 428 PGRGSHGQTPSPGALPLG-RQTSQQPAG----PPAQQRPPPQGG-----PPQPGPGPQRQ 477
Query: 64 GSSLHSEP------ERAGLGPAPGTESPQ 86
G L P +GLGP G+ PQ
Sbjct: 478 GPPLQQRPPPQGQQHLSGLGPPAGSPLPQ 506
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 37.7 bits (86), Expect = 0.035
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 11 NEAEAGALPAAARMGLEAP----RGGRRRQPGQQRPGPGAG-APAGRPEG--GGPWARTE 63
+E +A A PA A+ G E P G + G++ AP PE G A+ E
Sbjct: 40 SEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAE 99
Query: 64 GSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRS 118
E E+A GPA G E+P+A E AA G E K++ EP ++
Sbjct: 100 PPKA-PEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPS--KEEGEPKKT 151
Score = 32.0 bits (71), Expect = 1.9
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
Query: 12 EAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAG--------APAGRPEGGGPWARTE 63
+AE AA E P+ + Q PGP AG A A E P A E
Sbjct: 84 KAEPEKTEGAAEAKAEPPKAPEQEQAA---PGPAAGGEAPKAAEAAAAPAESAAPAAGEE 140
Query: 64 GSSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSS 119
S EP++ AP + +++ ++P ++ ++ TE S+
Sbjct: 141 PSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSST 196
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.7 bits (86), Expect = 0.035
Identities = 36/100 (36%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 12 EAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEP 71
+AE A AA AP R PG P P A P G +G TEG P
Sbjct: 660 DAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP-GSADGLCTIYETEG------P 712
Query: 72 ERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQ 111
E A PAPG P T G A AG G + PKQ
Sbjct: 713 ESAT--PAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ 750
Score = 37.4 bits (85), Expect = 0.046
Identities = 79/337 (23%), Positives = 104/337 (30%), Gaps = 54/337 (16%)
Query: 35 RQPGQQRPGP--GAGAPAGRPEGGGPWARTEG---SSLHSEPERAGLGPAPGTESPQAEF 89
R G RPGP G E TE S+L + R GP PGT SP
Sbjct: 119 RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR 178
Query: 90 WTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEWSWSELETTCLWTETGTDGLWTDP 149
+ + RP+ TE R S+ + E S +E + GL
Sbjct: 179 RSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 238
Query: 150 HRSDLQFQPEEASPWTQPGVHGP----WTELETHGSQTQPERVKSWADNLWTHQNSSSLQ 205
RS A+P + P GP H SQ +P+ +++
Sbjct: 239 SRS----LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA--------------- 279
Query: 206 THPEGACPSKEPSADG----SWKELYTDGSRTQQDIEGPWTEPYTDGS-----QKKQDTE 256
P P ++ +A S L T + P T P T S Q
Sbjct: 280 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLP 339
Query: 257 AARKQPGTGGFQIQQDTDGSWTQPS----TDGSQTAPGTDCLLGEPEDGPLEEPEPGELL 312
A P +Q T PS + GS T T L P PL P P
Sbjct: 340 LAPPSPSAPP-SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP---- 394
Query: 313 THLYSHLKCSPLCPVPRLIITPETP-EPEAQPVGPPS 348
+ P +P L P P P P+ PS
Sbjct: 395 -------QAPPALALPPLQAPPSPPASPPLSPLATPS 424
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 37.7 bits (86), Expect = 0.035
Identities = 36/100 (36%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 12 EAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEP 71
+AE A AA AP R PG P P A P G +G TEG P
Sbjct: 929 DAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP-GSADGLCTIYETEG------P 981
Query: 72 ERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQ 111
E A PAPG P T G A AG G + PKQ
Sbjct: 982 ESAT--PAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ 1019
Score = 34.7 bits (78), Expect = 0.30
Identities = 42/165 (25%), Positives = 58/165 (35%), Gaps = 13/165 (7%)
Query: 35 RQPGQQRPGP--GAGAPAGRPEGGGPWARTEG---SSLHSEPERAGLGPAPGTESPQAEF 89
R G RPGP G E TE S+L + R GP PGT SP
Sbjct: 119 RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR 178
Query: 90 WTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEWSWSELETTCLWTETGTDGLWTDP 149
+ + RP+ TE R S+ + E S +E + GL
Sbjct: 179 RSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 238
Query: 150 HRSDLQFQPEEASPWTQPGVHGP----WTELETHGSQTQPERVKS 190
RS A+P + P GP H SQ +P+ +++
Sbjct: 239 SRS----LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 37.7 bits (86), Expect = 0.035
Identities = 36/100 (36%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 12 EAEAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWARTEGSSLHSEP 71
+AE A AA AP R PG P P A P G +G TEG P
Sbjct: 621 DAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP-GSADGLCTIYETEG------P 673
Query: 72 ERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQ 111
E A PAPG P T G A AG G + PKQ
Sbjct: 674 ESAT--PAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ 711
Score = 36.6 bits (83), Expect = 0.079
Identities = 79/334 (23%), Positives = 108/334 (32%), Gaps = 44/334 (13%)
Query: 35 RQPGQQRPGP--GAGAPAGRPEGGGPWARTEG---SSLHSEPERAGLGPAPGTESPQAEF 89
R G RPGP G E TE S+L + R GP PGT SP
Sbjct: 110 RASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR 169
Query: 90 WTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHLEWSWSELETTCLWTETGTDGLWTDP 149
+ + RP+ TE R S+ + E S +E + GL
Sbjct: 170 RSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 229
Query: 150 HRSDLQFQPEEASPWTQPGVHGP----WTELETHGSQTQPERVKSWADNLWTHQ------ 199
RS A+P + P GP H SQ +P+ +++ T
Sbjct: 230 SRS----LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 285
Query: 200 -----NSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGPWTEPYTDGSQKKQD 254
+SS L T A PS PSA S + L + + P + GS Q
Sbjct: 286 ALGPLSSSPLATPSPSAPPS--PSAPPSLQTLPSPPATP------PSQATTSLGSPTLQA 337
Query: 255 TEAARKQPGTGGFQI-QQDTDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLEEPEPGELLT 313
T + P + P + P + P PL P P +
Sbjct: 338 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS------PPLSPLATPSP-QAPN 390
Query: 314 HLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPP 347
L HL +P P P +P P + P PP
Sbjct: 391 ALAVHLLQAPFSPPP----SPPVQAPFSPPASPP 420
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.035
Identities = 39/112 (34%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 15 AGALPAAARMGLEAPRGGRRRQPGQQR---PGPGAGAPAGRPEGGGPWARTEGSSLHS-- 69
A A AAA G GGR PG++R PG G A G P G G + G+ L S
Sbjct: 2 AAAAAAAAAAG---AAGGRGSGPGRRRHLVPGAGGEAGEGAPGGAGDY----GNGLESEE 54
Query: 70 -EPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSL 120
EPE L P P E P+ E + P A G G + P + E + L
Sbjct: 55 LEPEELLLEPEPEPE-PEEE-PPRPRAPPGAPGPGPGSGAPGSQEEEEEPGL 104
Score = 30.0 bits (66), Expect = 7.4
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 18/81 (22%)
Query: 304 EEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSASSF 363
EE EP ELL L P P PE E +P PP G G + S
Sbjct: 53 EELEPEELL-----------LEPEPE----PEPEEEPPRPRAPPGAPGPGPGSGAPGSQE 97
Query: 364 DESEDDVV---AGGGGASDPE 381
+E E +V G G DPE
Sbjct: 98 EEEEPGLVEGDPGDGAIEDPE 118
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 37.7 bits (86), Expect = 0.035
Identities = 60/240 (25%), Positives = 81/240 (33%), Gaps = 34/240 (14%)
Query: 148 DPHRSDLQFQPEEASPWTQPGVHGPWT----ELETHGSQTQPERVKSWADNLWTHQNSSS 203
+P +D+ PE G GPWT E+ +Q S H S +
Sbjct: 455 EPPSTDVPPSPEAG------GTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGT 508
Query: 204 LQTHPEGACPSKEPSADGSWK-ELYTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQP 262
P + P P A+ S + T G T Q + ++P G + A
Sbjct: 509 TLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSG 568
Query: 263 GT------GGFQIQQDTDGSWT--QPSTDGSQTAPGTDCLLGEPEDGPLEEPEPGELLTH 314
GT G Q + G+ T QP+T G TA PE G + PG +
Sbjct: 569 GTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQ-------TPEAGTSQPMPPG--MGT 619
Query: 315 LYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSASSFDESEDDVVAGG 374
SH +P T +TPEP P S+ SGG S D GG
Sbjct: 620 STSHQPTTPGGG------TAQTPEPGTSQPMPLSKSTPSSGGGPSEDKRFSVVDMAALGG 673
>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
Length = 360
Score = 37.4 bits (85), Expect = 0.046
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 14 EAGALPAAARMGLEAPRGGRRRQPGQQRPGPGAG--APAGRPEGGGPWARTEGSSLHSE- 70
E G+ P+ R GL +P + PG R GAG +P G+PE G + + LH E
Sbjct: 44 EPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQ-QDLHLES 102
Query: 71 --------PERAGLGPAPGTESPQ 86
PE P P E+P+
Sbjct: 103 PQRQPEYSPESPRCQPKPSEEAPK 126
Score = 30.4 bits (67), Expect = 5.7
Identities = 48/210 (22%), Positives = 72/210 (34%), Gaps = 35/210 (16%)
Query: 153 DLQFQPEEASPWTQPGVHGPWTELETHGSQTQPERVKSWADNLWTHQNSSSLQTHPEGAC 212
+ + PEE +PG P + GS +P + + L S Q PE
Sbjct: 34 EFESNPEETR---EPG-SPPSVQRAGLGSPERPPKTSPGSPRLQQGAGLESPQGQPEPGA 89
Query: 213 PSKEPSADGSWKELYTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQIQQD 272
S + D L+ + + Q P P + Q K EA + G +
Sbjct: 90 ASPQRQQD-----LHLESPQRQ-----PEYSPESPRCQPKPSEEAPKCSQDQGVLASELA 139
Query: 273 TDGSWTQPSTDGSQTAPGTDCLLGEPEDGPLEE---PEPGELLTHLYSHLKCSPLCPVPR 329
+ P Q P + G PE P ++ PEP + L L PR
Sbjct: 140 QNKEELTPGAPQHQLPP----VPGSPEPYPGQQAPGPEPSQPLLEL-----------TPR 184
Query: 330 LIITPETPEPEAQPVGPPSRVEGGSGGFSS 359
P +P + +P PP E +GGF +
Sbjct: 185 ---APGSPRGQHEPSKPPPAGETVTGGFGA 211
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 37.0 bits (84), Expect = 0.060
Identities = 76/389 (19%), Positives = 123/389 (31%), Gaps = 48/389 (12%)
Query: 17 ALPAAARMGLEAPRGGRRRQPGQQRPGPGAGAPAGRPEGGGPWA------------RTEG 64
A AA ++P G +P Q G G + GGG WA + G
Sbjct: 557 AWSGAANQEDKSPTWGEPPKPKSQHWGDGQRSNPAWSAGGGDWADSSSVLGHLGDGKKNG 616
Query: 65 SSLHSEPERAGLGPAPGTESPQAEFWTDGQTEPAAAGLGVETERPKQKTEPDRSSLRTHL 124
S ++ R+G G T S + + T+ ET +P P ++
Sbjct: 617 SGWDADSNRSGSGWNDTTRSGNSGWGNSTNTKANPGTNWGETLKP----GPQQNWASKPQ 672
Query: 125 EWSWSELETTCLWTETGTDGLWTDPHRSDLQFQPEEASPWTQPGVHGPWTELETHGSQTQ 184
+ + S +TGT W Q EA+ W +P ++E
Sbjct: 673 DNNVSNWGGAASVKQTGTG--WIGGPVPVKQKDSSEATGWEEPSPPSIRRKMEI------ 724
Query: 185 PERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGPWTEP 244
+ +W D ++ N+ ++ + + + T S T +E P P
Sbjct: 725 DDGTSAWGDP--SNYNNKTVNMWDRNNPVIQSSTTTNTTTTTTTTTSNTTHRVETP--PP 780
Query: 245 YTDGSQKKQDTEAARKQPGTGGF-QIQQDTDGSWTQPSTDGSQTAPGTDCLLGEPEDGP- 302
+ G+Q + G G + T+ SW +PS+ + GT P G
Sbjct: 781 HQAGTQLNRSPLLGPVSSGWGEMPNVHSKTENSWGEPSSPSTLVDNGTAAWGKPPSSGSG 840
Query: 303 --LEEPEPGELLTHLYSHLKCSPLCPVPRLIITPETPEPEAQPVGPPSRVEGGSGGFSSA 360
EP + + S LC +P + GSGG
Sbjct: 841 WGDHPAEPPVAFGRAGAPVAASALC----------------KPASKSMQEGWGSGGDEMN 884
Query: 361 SSFDESEDDVVAGGGGASDPEDRSGSKPW 389
S + ED+ A+ E S W
Sbjct: 885 LSTSQWEDEEGDVWNNAASQESTSSCSSW 913
>gi|157426862 transmembrane channel-like 5 isoform b [Homo sapiens]
Length = 948
Score = 37.0 bits (84), Expect = 0.060
Identities = 47/189 (24%), Positives = 65/189 (34%), Gaps = 14/189 (7%)
Query: 167 PGVHGPWTELETHGSQTQPERVKSWADNLWTHQNSSSLQTHPEGACPSKEPSADGSWKEL 226
P V GP + G+++ P V S T + P P G+
Sbjct: 36 PDVPGPLNNPDYPGTRSNPYSVASR-----TRPDYPGSLAEPNYPRSLSNPDYSGTRSNA 90
Query: 227 YTDGSRTQQDIEGPWTEPYTDGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQ 286
Y+ SRT D EP Q A+ +QP G Q D GS + + GS+
Sbjct: 91 YSAASRTSPDHPTSLPEPDYSEFQSHPYHRASSRQPDYPGSQRNPDFAGSSSSGNYAGSR 150
Query: 287 TAPGTDCLLGEPE----DGPLEEPEPGELLTHLYSHLKCS----PLCPVPRLIITPETPE 338
T P L EP+ + P P L H S + P + P+ P
Sbjct: 151 THPDHFGSL-EPDYPGAQSNSDHPGPRANLNHPGSRKNLEHTSFRINPYADSLGKPDYPG 209
Query: 339 PEAQPVGPP 347
+ QP PP
Sbjct: 210 ADIQPNSPP 218
Score = 31.2 bits (69), Expect = 3.3
Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 18/103 (17%)
Query: 205 QTHPEGACPSKEPSADGSWKELYTDGSRTQQDIEGPWTEP------------------YT 246
Q +P+ P P G+ Y+ SRT+ D G EP Y+
Sbjct: 33 QGYPDVPGPLNNPDYPGTRSNPYSVASRTRPDYPGSLAEPNYPRSLSNPDYSGTRSNAYS 92
Query: 247 DGSQKKQDTEAARKQPGTGGFQIQQDTDGSWTQPSTDGSQTAP 289
S+ D + +P FQ S QP GSQ P
Sbjct: 93 AASRTSPDHPTSLPEPDYSEFQSHPYHRASSRQPDYPGSQRNP 135
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,626,060
Number of Sequences: 37866
Number of extensions: 2122116
Number of successful extensions: 9859
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 388
Number of HSP's that attempted gapping in prelim test: 8653
Number of HSP's gapped (non-prelim): 1414
length of query: 683
length of database: 18,247,518
effective HSP length: 109
effective length of query: 574
effective length of database: 14,120,124
effective search space: 8104951176
effective search space used: 8104951176
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.