Guide to the Human Genome
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Name: GPR153 Sequence: fasta or formatted (609aa) NCBI GI: 46409372
Description:

G protein-coupled receptor 153

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         72           2
 C cysteine            2.3         14           1
 D aspartate           4.8         29           2
 E glutamate           4.3         26           2
 F phenylalanine       3.9         24           1
 G glycine             8.4         51           4
 H histidine           1.8         11           1
 I isoleucine          2.3         14           1
 K lysine              2.1         13           2
 L leucine            11.7         71           3
 M methionine          2.1         13           1
 N asparagine          1.0          6           1
 P proline             8.2         50           2
 Q glutamine           2.6         16           1
 R arginine            7.1         43           3
 S serine             10.2         62           2
 T threonine           4.3         26           2
 V valine              6.7         41           2
 W tryptophan          2.3         14           1
 Y tyrosine            2.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 153 
GPR162                0.365   G protein-coupled receptor 162 isoform 2 
GPR162                0.078   G protein-coupled receptor 162 isoform 1 
HTR1E                 0.027   5-hydroxytryptamine (serotonin) receptor 1E 
AGAP2                 0.025   centaurin, gamma 1 isoform PIKE-L 
OGFR                  0.022   opioid growth factor receptor 
DACT3                 0.022   thymus expressed gene 3-like 
CNOT3                 0.022   CCR4-NOT transcription complex, subunit 3 
SHANK1                0.022   SH3 and multiple ankyrin repeat domains 1 
HTR1F                 0.021   5-hydroxytryptamine (serotonin) receptor 1F 
LOC100128074          0.021   PREDICTED: hypothetical protein 
BBC3                  0.021   BCL2 binding component 3 isoform 1 
SAMD1                 0.020   sterile alpha motif domain containing 1 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
LOC100130360          0.019   PREDICTED: hypothetical protein 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
HTR6                  0.018   5-hydroxytryptamine (serotonin) receptor 6 
HRH3                  0.018   histamine receptor H3 
SYN1                  0.018   synapsin I isoform Ib 
HTR1A                 0.018   5-hydroxytryptamine (serotonin) receptor 1A 
LOC728597             0.018   PREDICTED: doublecortin domain-containing protein E...
LOC728597             0.018   PREDICTED: doublecortin domain-containing protein E...
CHRM1                 0.017   cholinergic receptor, muscarinic 1 
FGD1                  0.017   faciogenital dysplasia protein 
PRR12                 0.017   proline rich 12 
DCAF10                0.017   WD repeat domain 32 
TAF4                  0.017   TBP-associated factor 4 
ZXDC                  0.017   ZXD family zinc finger C isoform 2 
ZXDC                  0.017   ZXD family zinc finger C isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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