Guide to the Human Genome
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Name: LPIN3 Sequence: fasta or formatted (851aa) NCBI GI: 74271888
Description:

lipin 3

Referenced in:

Adipose Tissue
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         51           2
 C cysteine            1.1          9           1
 D aspartate           6.1         52           3
 E glutamate           7.6         65           2
 F phenylalanine       2.7         23           2
 G glycine             7.8         66           2
 H histidine           1.8         15           1
 I isoleucine          3.2         27           1
 K lysine              5.6         48           2
 L leucine            10.5         89           2
 M methionine          1.1          9           1
 N asparagine          2.4         20           1
 P proline             9.3         79           2
 Q glutamine           4.3         37           2
 R arginine            5.5         47           5
 S serine              9.9         84           2
 T threonine           5.2         44           2
 V valine              5.9         50           2
 W tryptophan          1.9         16           2
 Y tyrosine            2.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipin 3 
LPIN2                 0.456   lipin 2 
LPIN1                 0.423   lipin 1 
HCN4                  0.015   hyperpolarization activated cyclic nucleotide-gated p...
MAP1S                 0.014   BPY2 interacting protein 1 
NACA                  0.013   nascent polypeptide-associated complex alpha subuni...
HDGF2                 0.012   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.012   hepatoma-derived growth factor-related protein 2 iso...
DCAF5                 0.011   WD repeat domain 22 
LOC100133756          0.011   PREDICTED: hypothetical protein, partial 
DNAJC6                0.010   DnaJ (Hsp40) homolog, subfamily C, member 6 
LOC284297             0.010   hypothetical protein LOC284297 
ZNF469                0.010   zinc finger protein 469 
RP1L1                 0.010   retinitis pigmentosa 1-like 1 
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
PRG4                  0.009   proteoglycan 4 isoform B 
PRG4                  0.009   proteoglycan 4 isoform A 
ANKRD11               0.009   ankyrin repeat domain 11 
CCDC88B               0.009   coiled-coil domain containing 88 
MAPT                  0.009   microtubule-associated protein tau isoform 5 
ITPKC                 0.009   inositol 1,4,5-trisphosphate 3-kinase C 
C2orf71               0.009   hypothetical protein LOC388939 
TACC2                 0.008   transforming, acidic coiled-coil containing protein...
TROAP                 0.008   tastin isoform 1 
IRF7                  0.008   interferon regulatory factor 7 isoform d 
IRF7                  0.008   interferon regulatory factor 7 isoform a 
C2orf55               0.008   hypothetical protein LOC343990 
ITPKB                 0.008   1D-myo-inositol-trisphosphate 3-kinase B 
BNIPL                 0.008   BCL2/adenovirus E1B 19kD interacting protein like i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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