Guide to the Human Genome
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Name: FNBP4 Sequence: fasta or formatted (1017aa) NCBI GI: 158534059
Description:

formin binding protein 4

Referenced in:

Cytoskeleton
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         81           4
 C cysteine            0.8          8           1
 D aspartate           4.7         48           4
 E glutamate          11.0        112           6
 F phenylalanine       1.2         12           1
 G glycine             5.8         59           2
 H histidine           0.7          7           1
 I isoleucine          3.7         38           2
 K lysine              6.0         61           2
 L leucine             5.9         60           3
 M methionine          1.8         18           1
 N asparagine          3.1         32           1
 P proline            10.2        104          14
 Q glutamine           5.8         59           3
 R arginine            4.1         42           2
 S serine             10.9        111           5
 T threonine           7.9         80           5
 V valine              5.4         55           2
 W tryptophan          1.5         15           1
 Y tyrosine            1.5         15           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   formin binding protein 4 
WIPF3                 0.028   WAS/WASL interacting protein family, member 3 [Homo...
MLL4                  0.026   myeloid/lymphoid or mixed-lineage leukemia 4 
ESPN                  0.024   espin 
RAPH1                 0.024   Ras association and pleckstrin homology domains 1 is...
BRD4                  0.022   bromodomain-containing protein 4 isoform long 
SETD1B                0.022   SET domain containing 1B 
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.021   MYST histone acetyltransferase (monocytic leukemia)...
PRR12                 0.020   proline rich 12 
FMNL2                 0.020   formin-like 2 
JMY                   0.020   junction-mediating and regulatory protein 
LMOD2                 0.020   leiomodin 2 (cardiac) 
BAT3                  0.020   HLA-B associated transcript-3 isoform b 
BAT3                  0.020   HLA-B associated transcript-3 isoform b 
BAT3                  0.020   HLA-B associated transcript-3 isoform b 
BAT3                  0.020   HLA-B associated transcript-3 isoform a 
BAT2                  0.019   HLA-B associated transcript-2 
SF1                   0.018   splicing factor 1 isoform 1 
NCOR2                 0.017   nuclear receptor co-repressor 2 isoform 2 
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 1 [...
ZC3H4                 0.017   zinc finger CCCH-type containing 4 
SETBP1                0.016   SET binding protein 1 isoform a 
PCLO                  0.016   piccolo isoform 2 
PCLO                  0.016   piccolo isoform 1 
SETD1A                0.016   SET domain containing 1A 
ZFHX4                 0.016   zinc finger homeodomain 4 
SON                   0.016   SON DNA-binding protein isoform F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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