SYN1 11758

Name: SYN1	Sequence: fasta or formatted (669aa)		NCBI GI: 19924097
Description: synapsin I isoform Ib		Referenced in: Rab Synapses
Other entries for this name: alt prot [705aa] synapsin I isoform Ia
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 71 5 C cysteine 0.4 3 1 D aspartate 3.9 26 1 E glutamate 2.5 17 2 F phenylalanine 2.4 16 2 G glycine 11.2 75 4 H histidine 2.5 17 1 I isoleucine 2.7 18 2 K lysine 4.3 29 2 L leucine 5.5 37 2 M methionine 2.1 14 1 N asparagine 2.5 17 1 P proline 14.2 95 6 Q glutamine 8.8 59 2 R arginine 5.4 36 3 S serine 7.9 53 2 T threonine 4.5 30 2 V valine 5.8 39 3 W tryptophan 0.6 4 1 Y tyrosine 1.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synapsin I isoform Ib SYN1 0.988 synapsin I isoform Ia SYN2 0.459 synapsin II isoform IIa SYN2 0.436 synapsin II isoform IIb SYN3 0.425 synapsin III isoform IIIg SYN3 0.422 synapsin III isoform IIIa SYN3 0.383 synapsin III isoform IIIc PRB3 0.081 proline-rich protein BstNI subfamily 3 precursor [H... PRB1 0.076 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.075 proline-rich protein BstNI subfamily 2 PRB4 0.068 proline-rich protein BstNI subfamily 4 precursor [Ho... SRRM1 0.056 serine/arginine repetitive matrix 1 NACA 0.055 nascent polypeptide-associated complex alpha subuni... WDR33 0.055 WD repeat domain 33 isoform 1 PCLO 0.053 piccolo isoform 2 PCLO 0.053 piccolo isoform 1 SFPQ 0.053 splicing factor proline/glutamine rich (polypyrimidin... CPSF6 0.047 cleavage and polyadenylation specific factor 6, 68 ... FLJ22184 0.047 PREDICTED: hypothetical protein FLJ22184 TAF4 0.047 TBP-associated factor 4 PRB1 0.047 proline-rich protein BstNI subfamily 1 isoform 2 pre... COL2A1 0.047 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.047 collagen, type II, alpha 1 isoform 2 precursor [Hom... WIPF1 0.045 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.045 WAS/WASL interacting protein family, member 1 MLL2 0.045 myeloid/lymphoid or mixed-lineage leukemia 2 COL3A1 0.045 collagen type III alpha 1 preproprotein COL10A1 0.045 type X collagen alpha 1 precursor SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.044 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.