TNRC6C 13716

Name: TNRC6C	Sequence: fasta or formatted (1726aa)		NCBI GI: 217416332
Description: trinucleotide repeat containing 6C isoform 1		Referenced in: Additional Structural Proteins
Other entries for this name: alt prot [1690aa] trinucleotide repeat containing 6C isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 135 4 C cysteine 0.6 10 1 D aspartate 3.8 65 2 E glutamate 3.4 58 3 F phenylalanine 1.0 18 1 G glycine 11.8 204 3 H histidine 2.0 35 1 I isoleucine 2.6 45 2 K lysine 3.7 64 2 L leucine 6.6 114 2 M methionine 2.0 34 1 N asparagine 7.9 136 2 P proline 9.3 160 8 Q glutamine 6.0 104 3 R arginine 2.8 48 3 S serine 14.3 247 3 T threonine 6.5 113 9 V valine 3.9 68 2 W tryptophan 3.3 57 1 Y tyrosine 0.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.967 trinucleotide repeat containing 6C isoform 2 TNRC6A 0.333 trinucleotide repeat containing 6A TNRC6B 0.252 trinucleotide repeat containing 6B isoform 1 TNRC6B 0.177 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.154 trinucleotide repeat containing 6B isoform 3 HRNR 0.023 hornerin FLG2 0.016 filaggrin family member 2 DSPP 0.015 dentin sialophosphoprotein preproprotein LOC100133915 0.013 PREDICTED: hypothetical protein MED15 0.013 mediator complex subunit 15 isoform a MUC21 0.012 mucin 21 MED15 0.012 mediator complex subunit 15 isoform b DMKN 0.010 dermokine isoform 5 precursor DMKN 0.010 dermokine isoform 4 precursor DMKN 0.010 dermokine isoform 3 precursor DMKN 0.010 dermokine isoform 2 precursor MLL2 0.010 myeloid/lymphoid or mixed-lineage leukemia 2 LOC100292655 0.009 PREDICTED: similar to armadillo repeat containing, ... NOTCH1 0.008 notch1 preproprotein MUC12 0.008 PREDICTED: mucin 12 ARID1A 0.008 AT rich interactive domain 1A isoform a ARID1A 0.008 AT rich interactive domain 1A isoform b FOXP1 0.008 forkhead box P1 isoform 1 PHC1 0.008 polyhomeotic 1-like LOR 0.008 loricrin ZNF853 0.008 zinc finger protein 853 MAML2 0.008 mastermind-like 2 COL5A3 0.008 collagen, type V, alpha 3 preproprotein COL1A2 0.008 alpha 2 type I collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.