Guide to the Human Genome
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Name: ITPKB Sequence: fasta or formatted (946aa) NCBI GI: 194272161
Description:

1D-myo-inositol-trisphosphate 3-kinase B

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         66           3
 C cysteine            1.6         15           1
 D aspartate           4.4         42           2
 E glutamate           7.5         71           3
 F phenylalanine       2.5         24           2
 G glycine            10.0         95           3
 H histidine           1.2         11           1
 I isoleucine          2.7         26           2
 K lysine              5.3         50           3
 L leucine             7.5         71           2
 M methionine          2.5         24           1
 N asparagine          2.1         20           2
 P proline             9.5         90           4
 Q glutamine           4.7         44           2
 R arginine            7.6         72           3
 S serine             11.0        104           4
 T threonine           5.0         47           2
 V valine              5.0         47           2
 W tryptophan          1.6         15           1
 Y tyrosine            1.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   1D-myo-inositol-trisphosphate 3-kinase B 
ITPKA                 0.210   1D-myo-inositol-trisphosphate 3-kinase A 
ITPKC                 0.206   inositol 1,4,5-trisphosphate 3-kinase C 
COL2A1                0.016   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.016   collagen, type II, alpha 1 isoform 2 precursor [Hom...
C7orf51               0.014   hypothetical protein FLJ37538 
NACA                  0.013   nascent polypeptide-associated complex alpha subuni...
COL1A1                0.013   alpha 1 type I collagen preproprotein 
COL7A1                0.013   alpha 1 type VII collagen precursor 
COL3A1                0.013   collagen type III alpha 1 preproprotein 
NKX1-1                0.013   PREDICTED: NK1 homeobox 1 
LOC100291071          0.012   PREDICTED: hypothetical protein XP_002346951 
LOC100287198          0.012   PREDICTED: hypothetical protein XP_002342815 
LOC100287198          0.012   PREDICTED: hypothetical protein 
BSN                   0.012   bassoon protein 
COL16A1               0.011   alpha 1 type XVI collagen precursor 
SRRM1                 0.011   serine/arginine repetitive matrix 1 
COL15A1               0.011   alpha 1 type XV collagen precursor 
C10orf47              0.011   hypothetical protein LOC254427 
HCN2                  0.010   hyperpolarization activated cyclic nucleotide-gated...
FLJ37078              0.010   hypothetical protein LOC222183 
IPMK                  0.010   inositol polyphosphate multikinase 
GPRIN1                0.010   G protein-regulated inducer of neurite outgrowth 1 ...
CASKIN1               0.009   CASK interacting protein 1 
LOC100289737          0.009   PREDICTED: hypothetical protein XP_002347183 
LOC100288678          0.009   PREDICTED: hypothetical protein XP_002343039 
SRRM2                 0.009   splicing coactivator subunit SRm300 
TNRC18                0.009   trinucleotide repeat containing 18 
FNDC1                 0.009   fibronectin type III domain containing 1 
PRB2                  0.009   proline-rich protein BstNI subfamily 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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