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Search of human proteins with 18105012
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18105012 apoptosis related protein 3 isoform a [Homo
sapiens]
(171 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens] 366 e-102
gi|18105012 apoptosis related protein 3 isoform a [Homo sapiens] 366 e-102
gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens] 41 4e-04
gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens] 41 4e-04
gi|74136023 delta-like 1 homolog [Homo sapiens] 39 0.003
gi|4557679 jagged 1 precursor [Homo sapiens] 37 0.008
gi|134244285 Notch homolog 3 [Homo sapiens] 36 0.018
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 35 0.041
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 35 0.041
gi|21704279 jagged 2 isoform b precursor [Homo sapiens] 35 0.041
gi|21704277 jagged 2 isoform a precursor [Homo sapiens] 35 0.041
gi|55770876 notch4 preproprotein [Homo sapiens] 35 0.041
gi|148833508 notch1 preproprotein [Homo sapiens] 34 0.070
gi|112420992 crumbs homolog 2 [Homo sapiens] 34 0.070
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 33 0.092
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 33 0.16
gi|61743978 stabilin 1 precursor [Homo sapiens] 33 0.16
gi|4506115 protein C [Homo sapiens] 32 0.20
gi|24041035 notch 2 preproprotein [Homo sapiens] 32 0.20
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 32 0.20
gi|38348304 von Willebrand factor A domain containing 2 [Homo sa... 32 0.20
gi|24430141 fibrillin 1 precursor [Homo sapiens] 32 0.27
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 32 0.27
gi|153946395 tenascin C precursor [Homo sapiens] 32 0.27
gi|40217843 cartilage oligomeric matrix protein precursor [Homo ... 32 0.27
gi|61743980 stabilin 2 precursor [Homo sapiens] 32 0.27
gi|46397353 Notch homolog 2 N-terminal like protein [Homo sapiens] 32 0.27
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 32 0.35
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 32 0.35
gi|122937283 6720455I24Rik homolog [Homo sapiens] 32 0.35
>gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens]
Length = 284
Score = 366 bits (940), Expect = e-102
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ 60
MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ
Sbjct: 114 MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ 173
Query: 61 LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL 120
LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL
Sbjct: 174 LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL 233
Query: 121 LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS 171
LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS
Sbjct: 234 LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS 284
>gi|18105012 apoptosis related protein 3 isoform a [Homo sapiens]
Length = 171
Score = 366 bits (940), Expect = e-102
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ 60
MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ
Sbjct: 1 MLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVIIDLQANPLKGDLANTFRGFTQ 60
Query: 61 LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL 120
LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL
Sbjct: 61 LQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGL 120
Query: 121 LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS 171
LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS
Sbjct: 121 LQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSVSILLWATQRRKAKTS 171
>gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens]
Length = 383
Score = 41.2 bits (95), Expect = 4e-04
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 89 QICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
+ C +++C T P C G C+ DG G CVC GFHG C R+
Sbjct: 86 KFCDKDEHICT-TQSP--CQNGGQCMYDGGGEYHCVCLPGFHGRDCERK 131
>gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens]
Length = 383
Score = 41.2 bits (95), Expect = 4e-04
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 89 QICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
+ C +++C T P C G C+ DG G CVC GFHG C R+
Sbjct: 86 KFCDKDEHICT-TQSP--CQNGGQCMYDGGGEYHCVCLPGFHGRDCERK 131
>gi|74136023 delta-like 1 homolog [Homo sapiens]
Length = 383
Score = 38.5 bits (88), Expect = 0.003
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 87 DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
D ++C C++ C NG+CV GL +C CA G+ G C ++
Sbjct: 81 DGELCDRDVRACSSAP----CANNGTCVSLDDGLYECSCAPGYSGKDCQKK 127
>gi|4557679 jagged 1 precursor [Homo sapiens]
Length = 1218
Score = 37.0 bits (84), Expect = 0.008
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 69 HVNCPGGI--NAWNTIT-SYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVC 125
H C GI W + + Q+C N C G + C G+C GP QC C
Sbjct: 268 HPGCVHGICNEPWQCLCETNWGGQLCDKDLNYC---GTHQPCLNGGTCSNTGPDKYQCSC 324
Query: 126 ADGFHGYKC 134
+G+ G C
Sbjct: 325 PEGYSGPNC 333
Score = 33.9 bits (76), Expect = 0.070
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 87 DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+ IC N C+ P C +G+CV DG +C CA GF G C
Sbjct: 775 EGPICAQNTNDCS----PHPCYNSGTCV-DGDNWYRCECAPGFAGPDC 817
Score = 31.2 bits (69), Expect = 0.46
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 100 NTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
N + C G+C+ DG +C+C+DG+ G C
Sbjct: 631 NDCESNPCRNGGTCI-DGVNSYKCICSDGWEGAYC 664
Score = 26.9 bits (58), Expect = 8.6
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C + + C D C G+C +G +C+C G+ G C
Sbjct: 702 CHSRDSQC----DEATCNNGGTCYDEGDAF-KCMCPGGWEGTTC 740
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 35.8 bits (81), Expect = 0.018
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 100 NTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMR 136
N DP C GSC DG G C C GF G +C R
Sbjct: 851 NDCDPNPCLNGGSC-QDGVGSFSCSCLPGFAGPRCAR 886
Score = 31.6 bits (70), Expect = 0.35
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 72 CPGGINAWN-TITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C +N ++ T S CQ + C +T C CV D P +C CA+GF
Sbjct: 484 CKDRVNGFSCTCPSGFSGSTCQLDVDECASTP----CRNGAKCV-DQPDGYECRCAEGFE 538
Query: 131 GYKCMR 136
G C R
Sbjct: 539 GTLCDR 544
Score = 30.4 bits (67), Expect = 0.78
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 97 LCNNTG---DPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
LC N P C G+C G C C GF G C
Sbjct: 193 LCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGFEGQNC 233
Score = 29.6 bits (65), Expect = 1.3
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
P C G+CV DG C+C G+ G C +
Sbjct: 930 PSSCFNGGTCV-DGVNSFSCLCRPGYTGAHCQHE 962
Score = 27.3 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 72 CPGGINAWNT-ITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C G+N +N Q C + C P C G+C + G CVC +G+
Sbjct: 251 CVDGVNTYNCQCPPEWTGQFCTEDVDECQL--QPNACHNGGTCF-NTLGGHSCVCVNGWT 307
Query: 131 GYKC 134
G C
Sbjct: 308 GESC 311
Score = 26.9 bits (58), Expect = 8.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ + C G+P C G+C+ + PG +C C G+ G C
Sbjct: 155 CRSDVDECR-VGEP--CRHGGTCL-NTPGSFRCQCPAGYTGPLC 194
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 34.7 bits (78), Expect = 0.041
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 107 CPENGSCVPD-----GPGLLQCVCADGFHGYKC 134
C GSCV D G G+ CVC GFHG C
Sbjct: 1183 CLNGGSCVSDRNFSPGSGVYLCVCLPGFHGSLC 1215
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 34.7 bits (78), Expect = 0.041
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 23/68 (33%)
Query: 69 HVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADG 128
H++CP G+ N C+NT C G+C+P+ CVCA G
Sbjct: 564 HLSCPEGLWGVN-----------------CSNTCT---CKNGGTCLPENGN---CVCAPG 600
Query: 129 FHGYKCMR 136
F G C R
Sbjct: 601 FRGPSCQR 608
Score = 28.1 bits (61), Expect = 3.9
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 98 CNNTGDPEMCPENGSCVPD----GPGLLQCVCADGFHGYKC 134
C+ D P NG+C+ + G +C DGF+G C
Sbjct: 319 CDCAPDARCFPANGACLCEHGFTGDRCTDRLCPDGFYGLSC 359
>gi|21704279 jagged 2 isoform b precursor [Homo sapiens]
Length = 1200
Score = 34.7 bits (78), Expect = 0.041
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+C N C G C G+C+ P +C C DG+ G C
Sbjct: 303 LCDKDLNYC---GSHHPCTNGGTCINAEPDQYRCTCPDGYSGRNC 344
Score = 32.0 bits (71), Expect = 0.27
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 87 DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+ + C N CN P C G CV DG +C CA GF G C
Sbjct: 744 EGRTCTHNTNDCN----PLPCYNGGICV-DGVNWFRCECAPGFAGPDC 786
Score = 31.2 bits (69), Expect = 0.46
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 99 NNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
N++ P C G+CV G C+C DG+ G C
Sbjct: 714 NSSCLPNPCVNGGTCVGSGASF-SCICRDGWEGRTC 748
Score = 29.3 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 106 MCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+C +G CV G C+C GF G C
Sbjct: 567 VCGPHGRCVSQPGGNFSCICDSGFTGTYC 595
Score = 28.1 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 16/63 (25%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHG 131
CP W T +D C+GQ C G+C D QCVC GF G
Sbjct: 411 CP---EQWVGATCQLDVNDCRGQ------------CQHGGTC-KDLVNGYQCVCPRGFGG 454
Query: 132 YKC 134
C
Sbjct: 455 RHC 457
Score = 27.3 bits (59), Expect = 6.6
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 15/66 (22%)
Query: 69 HVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADG 128
H +CP G + +C+ +LC +P C NG+ + G C C D
Sbjct: 483 HCHCPQGFSG----------PLCEVDVDLC----EPSPC-RNGARCYNLEGDYYCACPDD 527
Query: 129 FHGYKC 134
F G C
Sbjct: 528 FGGKNC 533
Score = 26.9 bits (58), Expect = 8.6
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 19/65 (29%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSC--VPDGPGLLQCVCADGF 129
CP G + N C+ ++ C T +P C GSC VP G +C C G+
Sbjct: 335 CPDGYSGRN----------CEKAEHAC--TSNP--CANGGSCHEVPSG---FECHCPSGW 377
Query: 130 HGYKC 134
G C
Sbjct: 378 SGPTC 382
>gi|21704277 jagged 2 isoform a precursor [Homo sapiens]
Length = 1238
Score = 34.7 bits (78), Expect = 0.041
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+C N C G C G+C+ P +C C DG+ G C
Sbjct: 303 LCDKDLNYC---GSHHPCTNGGTCINAEPDQYRCTCPDGYSGRNC 344
Score = 32.0 bits (71), Expect = 0.27
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 87 DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+ + C N CN P C G CV DG +C CA GF G C
Sbjct: 782 EGRTCTHNTNDCN----PLPCYNGGICV-DGVNWFRCECAPGFAGPDC 824
Score = 31.2 bits (69), Expect = 0.46
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 99 NNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
N++ P C G+CV G C+C DG+ G C
Sbjct: 752 NSSCLPNPCVNGGTCVGSGASF-SCICRDGWEGRTC 786
Score = 29.6 bits (65), Expect = 1.3
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 13/59 (22%)
Query: 76 INAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
I W I +I+ C+GQ C G+C D QCVC GF G C
Sbjct: 450 IPGWKGINCHINVNDCRGQ------------CQHGGTC-KDLVNGYQCVCPRGFGGRHC 495
Score = 29.3 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 106 MCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+C +G CV G C+C GF G C
Sbjct: 605 VCGPHGRCVSQPGGNFSCICDSGFTGTYC 633
Score = 27.3 bits (59), Expect = 6.6
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 15/66 (22%)
Query: 69 HVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADG 128
H +CP G + +C+ +LC +P C NG+ + G C C D
Sbjct: 521 HCHCPQGFSG----------PLCEVDVDLC----EPSPC-RNGARCYNLEGDYYCACPDD 565
Query: 129 FHGYKC 134
F G C
Sbjct: 566 FGGKNC 571
Score = 26.9 bits (58), Expect = 8.6
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 19/65 (29%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSC--VPDGPGLLQCVCADGF 129
CP G + N C+ ++ C T +P C GSC VP G +C C G+
Sbjct: 335 CPDGYSGRN----------CEKAEHAC--TSNP--CANGGSCHEVPSG---FECHCPSGW 377
Query: 130 HGYKC 134
G C
Sbjct: 378 SGPTC 382
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 34.7 bits (78), Expect = 0.041
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 87 DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
D Q C + + C + + C +G+C P PG C C GF G +C
Sbjct: 961 DGQNCSKELDACQS----QPCHNHGTCTPK-PGGFHCACPPGFVGLRC 1003
Score = 32.3 bits (72), Expect = 0.20
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
CQ + + C DP CP SC+ D PG C+C GF G C
Sbjct: 586 CQTEVDEC--LSDP--CPVGASCL-DLPGAFFCLCPSGFTGQLC 624
Score = 32.0 bits (71), Expect = 0.27
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
CQ + C + C G+CV + PG C+CA GF G +C
Sbjct: 764 CQTSTDYCVSAP----CFNGGTCV-NRPGTFSCLCAMGFQGPRC 802
Score = 31.6 bits (70), Expect = 0.35
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
P C GSC+ + PG C+C G+ G +C
Sbjct: 443 PSPCEHGGSCL-NTPGSFNCLCPPGYTGSRC 472
Score = 30.8 bits (68), Expect = 0.59
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
CQ +LC + CP N C+ GP C+C G+ G C
Sbjct: 841 CQTLMDLCAQ----KPCPRNSHCLQTGPS-FHCLCLQGWTGPLC 879
Score = 30.4 bits (67), Expect = 0.78
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
C G C D PG C C GF G +C +
Sbjct: 560 CANGGQC-QDQPGAFHCKCLPGFEGPRCQTE 589
Score = 30.0 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
PE C G+C+ G C CA GF G C
Sbjct: 32 PEPCANGGTCLSLSLGQGTCQCAPGFLGETC 62
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C + C G P C G+C + G CVC G+ G C
Sbjct: 311 CSEDVDECETQGPPH-CRNGGTC-QNSAGSFHCVCVSGWGGTSC 352
Score = 29.6 bits (65), Expect = 1.3
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
Query: 64 LILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQC 123
L+ H CP G+ + Q+C+ + N C + C + C D QC
Sbjct: 493 LLATFHCLCPPGL----------EGQLCEVETNECASAP----CLNHADC-HDLLNGFQC 537
Query: 124 VCADGFHGYKC 134
+C GF G +C
Sbjct: 538 ICLPGFSGTRC 548
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
+CQ N C + C +C+ G L C CA G+ G C ++
Sbjct: 926 LCQDHVNPCES----RPCQNGATCMAQPSGYL-CQCAPGYDGQNCSKE 968
Score = 28.5 bits (62), Expect = 3.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
P C + G C G QC C G+ G +C
Sbjct: 124 PSFCSKRGRCHIQASGRPQCSCMPGWTGEQC 154
Score = 27.7 bits (60), Expect = 5.0
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKCMR 136
C G C+ P + QC C GF G+ C R
Sbjct: 165 CVNGGVCLATYPQI-QCHCPPGFEGHACER 193
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 33.9 bits (76), Expect = 0.070
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 72 CPGGINAWNTITSY-IDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C GIN++ + CQ N C D + C G+C DG G +C C G+
Sbjct: 998 CVDGINSFTCLCPPGFTGSYCQHDVNEC----DSQPCLHGGTC-QDGCGSYRCTCPQGYT 1052
Query: 131 GYKC 134
G C
Sbjct: 1053 GPNC 1056
Score = 32.3 bits (72), Expect = 0.20
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
P C G+C P G +C C GF G C
Sbjct: 224 PSPCQNGGTCRPTGDVTHECACLPGFTGQNC 254
Score = 31.6 bits (70), Expect = 0.35
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+CQ + C +T C C+ DGP CVC +G+ G C
Sbjct: 524 LCQYDVDECASTP----CKNGAKCL-DGPNTYTCVCTEGYTGTHC 563
Score = 31.2 bits (69), Expect = 0.46
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 91 CQGQKNLCNNTGDP----EMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ + CN DP C NG+CV D G C C GF G +C
Sbjct: 1218 CEINVDDCNPPVDPVSRSPKCFNNGTCV-DQVGGYSCTCPPGFVGERC 1264
Score = 30.0 bits (66), Expect = 1.0
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLC-NNTGD--PEMCPENGSCVPDGPGLLQCVCADG 128
C G N + + SY C NNT D C G+CV DG C+C G
Sbjct: 954 CRNGANCTDCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCV-DGINSFTCLCPPG 1012
Query: 129 FHGYKC 134
F G C
Sbjct: 1013 FTGSYC 1018
Score = 28.5 bits (62), Expect = 3.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 103 DPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
DP+ C GSC DG C+C G+ G+ C
Sbjct: 571 DPDPC-HYGSC-KDGVATFTCLCRPGYTGHHC 600
Score = 28.1 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
P C +NG+ D G C C G+HG C +
Sbjct: 1151 PSPC-QNGATCTDYLGGYSCKCVAGYHGVNCSEE 1183
Score = 27.3 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 72 CPGGINAWNT-ITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C G+N +N Q C + C P C G+C + G CVC +G+
Sbjct: 272 CVDGVNTYNCRCPPEWTGQYCTEDVDECQLM--PNACQNGGTC-HNTHGGYNCVCVNGWT 328
Query: 131 GYKC 134
G C
Sbjct: 329 GEDC 332
Score = 26.9 bits (58), Expect = 8.6
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKC 134
C + +C+ D G QC+C G+ G C
Sbjct: 461 CQNDATCL-DQIGEFQCICMPGYEGVHC 487
Score = 26.9 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
P C GSC DG C C GF G C
Sbjct: 913 PNPCHNGGSCT-DGINTAFCDCLPGFRGTFC 942
>gi|112420992 crumbs homolog 2 [Homo sapiens]
Length = 1285
Score = 33.9 bits (76), Expect = 0.070
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKC 134
C GSC+ DG G +CVCA G+ G +C
Sbjct: 155 CLHGGSCL-DGVGSFRCVCAPGYGGTRC 181
Score = 29.3 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 107 CPENGSCVPDGPGL--LQCVCADGFHGYKC 134
C CVP GP +C C GF G +C
Sbjct: 76 CHHGALCVPQGPDPTGFRCYCVPGFQGPRC 105
Score = 26.9 bits (58), Expect = 8.6
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 107 CPENGSCVP---DGPGLLQCVCADGFHGYKCMRQGSFSLL 143
CP +C+P G C C G HG C + +FS++
Sbjct: 405 CPLAATCIPIFESGVHSYVCHCPPGTHGPFCGQNTTFSVM 444
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 33.5 bits (75), Expect = 0.092
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 96 NLCNNTGD--PEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQGSFSLLMFFG 147
N CN + +C C+PD C+C G+ G C + SFS F G
Sbjct: 2908 NTCNQSVSCLNNLCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMG 2961
Score = 31.2 bits (69), Expect = 0.46
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 89 QICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
Q C + NLC+ +P C N +C+ C+C + F G C
Sbjct: 844 QFCHQRYNLCDLLHNP--CRNNSTCLALVDANQHCICREEFEGKNC 887
Score = 29.6 bits (65), Expect = 1.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 99 NNTGDPEM----CPENGSCVPDGPG-LLQCVCADGFHGYKC 134
+N +PE+ C G CV DGPG C C GF G C
Sbjct: 1119 DNCAEPELNSVICLNGGICV-DGPGHTFDCRCLPGFSGQFC 1158
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 32.7 bits (73), Expect = 0.16
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKC 134
C +C+P G QC+C DGF G C
Sbjct: 4113 CQHGATCMPAGEYEFQCLCRDGFKGDLC 4140
Score = 27.3 bits (59), Expect = 6.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQGS 139
+C+ ++N C E C G+C +C+C GF G +C +QGS
Sbjct: 4139 LCEHEENPCQLR---EPCLHGGTCQGT-----RCLCLPGFSGPRC-QQGS 4179
>gi|61743978 stabilin 1 precursor [Homo sapiens]
Length = 2570
Score = 32.7 bits (73), Expect = 0.16
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 74 GGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHG 131
GG+ T + C C TG + C + CV G+ +C C DGF G
Sbjct: 798 GGVCQQGTCAPGFSGRFCNESMGDCGPTGLAQHCHLHARCVSQ-EGVARCRCLDGFEG 854
Score = 32.7 bits (73), Expect = 0.16
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHG 131
P C N +CV D G C CA G+ G
Sbjct: 1421 PRKCDPNANCVQDSAGASTCACAAGYSG 1448
Score = 32.3 bits (72), Expect = 0.20
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 69 HVNCPGGINAWNTIT---SYI-DNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCV 124
H NC T T Y+ D ++CQ + + G C + C+P GP + C
Sbjct: 1469 HANCTKVAPGQRTCTCQDGYMGDGELCQEINSCLIHHGG---CHIHAECIPTGPQQVSCS 1525
Query: 125 CADGFHG 131
C +G+ G
Sbjct: 1526 CREGYSG 1532
Score = 29.6 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 102 GDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
G C + G C+ G QC+C GF G C
Sbjct: 1974 GPSSPCSDRGVCMDGMSGSGQCLCRSGFAGTAC 2006
Score = 29.3 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHG 131
C EN CVP G C C G+ G
Sbjct: 873 CSENAECVPGSLGTHHCTCHKGWSG 897
Score = 28.9 bits (63), Expect = 2.3
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 62 QTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLL 121
Q L PQ+ C + + Y QG + N P C C G
Sbjct: 200 QELRCPQNTQCSAEAPSCRCLPGYTQ----QGSECRAPNPCWPSPCSLLAQCSVSPKGQA 255
Query: 122 QCVCADGFHG 131
QC C + +HG
Sbjct: 256 QCHCPENYHG 265
Score = 28.1 bits (61), Expect = 3.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 106 MCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+C +G C G +C C +GFHG C
Sbjct: 1339 VCSGHGQCQDRFLGSGECHCHEGFHGTAC 1367
Score = 26.9 bits (58), Expect = 8.6
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHG 131
C + +C PG C C DG+ G
Sbjct: 1466 CSPHANCTKVAPGQRTCTCQDGYMG 1490
>gi|4506115 protein C [Homo sapiens]
Length = 461
Score = 32.3 bits (72), Expect = 0.20
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 106 MCPENGSCVPDGPGLLQCVCADGFHGYKCMRQGSF 140
+C +G+C+ DG G C C G+ G C R+ SF
Sbjct: 104 LCCGHGTCI-DGIGSFSCDCRSGWEGRFCQREVSF 137
>gi|24041035 notch 2 preproprotein [Homo sapiens]
Length = 2471
Score = 32.3 bits (72), Expect = 0.20
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 69 HVNCPGGINAWNTITSYIDNQI-CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCAD 127
H NC GG++ + + I C+ KN C + C G+C G +C C
Sbjct: 731 HGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNP----CQNGGTCDNLVNGY-RCTCKK 785
Query: 128 GFHGYKC 134
GF GY C
Sbjct: 786 GFKGYNC 792
Score = 32.0 bits (71), Expect = 0.27
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 89 QICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
Q C+ N C+ G C G+C+ + PG QC C GF G C
Sbjct: 177 QKCETDVNECDIPGH---CQHGGTCL-NLPGSYQCQCPQGFTGQYC 218
Score = 31.2 bits (69), Expect = 0.46
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHGYKC 134
C GSC+ DG C+C GF G KC
Sbjct: 920 CQNGGSCM-DGVNTFSCLCLPGFTGDKC 946
Score = 30.8 bits (68), Expect = 0.59
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 72 CPGGINAWNTITSY-------IDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCV 124
C G + + SY D C+ N C + C G+CV DG C+
Sbjct: 958 CKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESS----CFNGGTCV-DGINSFSCL 1012
Query: 125 CADGFHGYKCMRQ 137
C GF G C+ +
Sbjct: 1013 CPVGFTGSFCLHE 1025
Score = 30.0 bits (66), Expect = 1.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKCMR 136
P C G+C G +C C GF G C R
Sbjct: 227 PSPCVNGGTCRQTGDFTFECNCLPGFEGSTCER 259
Score = 29.3 bits (64), Expect = 1.7
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ + N C + C NG CV D QC+C GF G C
Sbjct: 491 CELEINECQSNP----CVNNGQCV-DKVNRFQCLCPPGFTGPVC 529
Score = 28.1 bits (61), Expect = 3.9
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 72 CPGGINAWNT-ITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C G+N +N Q C + C P C G+C G CVC +G+
Sbjct: 275 CVDGVNTYNCRCPPQWTGQFCTEDVDEC--LLQPNACQNGGTCANRNGGY-GCVCVNGWS 331
Query: 131 GYKC 134
G C
Sbjct: 332 GDDC 335
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 90 ICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
+CQ + C++T C C+ D P +C CA GF G C
Sbjct: 528 VCQIDIDDCSSTP----CLNGAKCI-DHPNGYECQCATGFTGVLC 567
Score = 26.9 bits (58), Expect = 8.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 105 EMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
E C G CV G C C +GF G C +
Sbjct: 33 EPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHR 65
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 32.3 bits (72), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C G P++C NG C G QCVC G+ G C
Sbjct: 796 CTIDGCPDLCNGNGRCTL-GQNSWQCVCQTGWRGPGC 831
>gi|38348304 von Willebrand factor A domain containing 2 [Homo
sapiens]
Length = 725
Score = 32.3 bits (72), Expect = 0.20
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 95 KNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHG 131
+ C D + C G+CVP+G QC+C F G
Sbjct: 292 RTTCPGPCDSQPCQNGGTCVPEGLDGYQCLCPLAFGG 328
>gi|24430141 fibrillin 1 precursor [Homo sapiens]
Length = 2871
Score = 32.0 bits (71), Expect = 0.27
Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 22/77 (28%)
Query: 53 NTFRGFTQLQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGS 112
NT GFT CP G +T S IDN C NLC + G +C
Sbjct: 2502 NTIGGFT----------CKCPPGFTQHHT--SCIDNNECTSDINLCGSKG---ICQNT-- 2544
Query: 113 CVPDGPGLLQCVCADGF 129
PG C C GF
Sbjct: 2545 -----PGSFTCECQRGF 2556
Score = 28.9 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
CP G I++ ID C+ +LC NG CV + G QC C G+H
Sbjct: 1140 CPPGHQLSPNISACIDINECELSAHLC----------PNGRCV-NLIGKYQCACNPGYH 1187
Score = 27.7 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 11/59 (18%)
Query: 72 CPGGINAWNTITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFH 130
C G + T T D C +CNN G C+ + G CVC GFH
Sbjct: 515 CRAGYQSTLTRTECRDIDECLQNGRICNN----------GRCI-NTDGSFHCVCNAGFH 562
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 32.0 bits (71), Expect = 0.27
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 105 EMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
E C G+C G+ C C GF G KC +Q
Sbjct: 4238 EHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQ 4270
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 32.0 bits (71), Expect = 0.27
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C + P C G CV DG QCVC DGF G C
Sbjct: 496 CRDRQCPRDCSNRGLCV-DG----QCVCEDGFTGPDC 527
Score = 31.2 bits (69), Expect = 0.46
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ P C G CV +CVC GF GY C
Sbjct: 434 CSQLRCPNDCHSRGRCVEG-----KCVCEQGFKGYDC 465
Score = 30.0 bits (66), Expect = 1.0
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 100 NTGDPEMCPEN----GSCVPDGPGLLQCVCADGFHGYKC 134
N +PE CP N G C+ DG QC+C DGF G C
Sbjct: 184 NCSEPE-CPGNCHLRGRCI-DG----QCICDDGFTGEDC 216
Score = 29.6 bits (65), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C++ P C ++G CV CVC DG+ G C
Sbjct: 465 CSDMSCPNDCHQHGRCVNG-----MCVCDDGYTGEDC 496
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
C P C G CV QCVC +GF G C Q
Sbjct: 527 CAELSCPNDCHGQGRCVNG-----QCVCHEGFMGKDCKEQ 561
Score = 29.3 bits (64), Expect = 1.7
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C P C G CV DG QC+C +GF G C
Sbjct: 558 CKEQRCPSDCHGQGRCV-DG----QCICHEGFTGLDC 589
Score = 28.9 bits (63), Expect = 2.3
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQ 137
C+ P C + G CV C+C +G+ G C R+
Sbjct: 216 CSQLACPSDCNDQGKCVNG-----VCICFEGYAGADCSRE 250
Score = 28.5 bits (62), Expect = 3.0
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 10/35 (28%)
Query: 105 EMCP-----ENGSCVPDGPGLLQCVCADGFHGYKC 134
E+CP E+G+CV DG CVC DGF G C
Sbjct: 250 EICPVPCSEEHGTCV-DG----LCVCHDGFAGDDC 279
Score = 27.7 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ P C G CV DG +C C DGF G C
Sbjct: 372 CSEKRCPADCHNRGRCV-DG----RCECDDGFTGADC 403
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C P C G C QCVC +GF G C
Sbjct: 341 CGKPTCPHACHTQGRCEEG-----QCVCDEGFAGVDC 372
Score = 27.3 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C P C +G CV QCVC +G+ G C
Sbjct: 403 CGELKCPNGCSGHGRCVNG-----QCVCDEGYTGEDC 434
>gi|40217843 cartilage oligomeric matrix protein precursor [Homo
sapiens]
Length = 757
Score = 32.0 bits (71), Expect = 0.27
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHG 131
CQ + G P C E+ CV + G CVCA G+ G
Sbjct: 221 CQRRAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAG 261
>gi|61743980 stabilin 2 precursor [Homo sapiens]
Length = 2551
Score = 32.0 bits (71), Expect = 0.27
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHG 131
C +N SC+ GPG +C C GF G
Sbjct: 922 CHDNASCLYVGPGQNECECKKGFRG 946
Score = 30.4 bits (67), Expect = 0.78
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 98 CNNT--GDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
CN G C NG C G C+C +GF G +C
Sbjct: 737 CNQCPGGFSNPCSGNGQCADSLGGNGTCICEEGFQGSQC 775
Score = 30.4 bits (67), Expect = 0.78
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 92 QGQKNLCNN----TG-DPEMCPENGSCVPDGPGLLQCVCADGFHG 131
+G LC+ TG P C N C+ G G CVC G+ G
Sbjct: 859 EGDGTLCSEMDPCTGLTPGGCSRNAECIKTGTGTHTCVCQQGWTG 903
Score = 28.5 bits (62), Expect = 3.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 107 CPENGSCVPDGPGLLQCVCADGFHG 131
C N +C PG +C+C G+ G
Sbjct: 332 CHRNANCTTVAPGRTECICQKGYVG 356
Score = 28.1 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 98 CNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHG 131
CN T C + +C+ + G C CA GF G
Sbjct: 1436 CNGT-----CHTSANCLTNSDGTASCKCAAGFQG 1464
>gi|46397353 Notch homolog 2 N-terminal like protein [Homo sapiens]
Length = 236
Score = 32.0 bits (71), Expect = 0.27
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 89 QICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
Q C+ N C+ G C G+C+ + PG QC C GF G C
Sbjct: 138 QKCETDVNECDIPGH---CQHGGTCL-NLPGSYQCQCLQGFTGQYC 179
>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
Length = 993
Score = 31.6 bits (70), Expect = 0.35
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 21/67 (31%)
Query: 90 ICQGQ----KNLCNN--TGDPEMCPE--------NGSCVPDG---PGLLQCVCADGFH-- 130
ICQ K +C + TGD + C + N CV D PG +C C DGFH
Sbjct: 45 ICQNTPRSYKCICKSGYTGDGKHCKDVDECEREDNAGCVHDCVNIPGNYRCTCYDGFHLA 104
Query: 131 --GYKCM 135
G+ C+
Sbjct: 105 HDGHNCL 111
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 31.6 bits (70), Expect = 0.35
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 14/60 (23%)
Query: 79 WN----TITSYIDNQICQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
WN TI Y+D + +G LCN NG C D G CVC G+ G C
Sbjct: 781 WNGEHCTIAHYLDRVVKEGCPGLCNG---------NGRCTLDLNG-WHCVCQLGWRGAGC 830
>gi|122937283 6720455I24Rik homolog [Homo sapiens]
Length = 1413
Score = 31.6 bits (70), Expect = 0.35
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 91 CQGQKNLCNNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
C+ + + C D C G C G G CVC + F GY C
Sbjct: 826 CETEVDAC----DSSPCQHGGRC-ESGGGAYLCVCPESFFGYHC 864
Score = 31.2 bits (69), Expect = 0.46
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 104 PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
P+ C GSCV D G C+CA+ F G +C
Sbjct: 393 PDPCLNGGSCV-DLVGNYTCLCAEPFKGLRC 422
Score = 30.4 bits (67), Expect = 0.78
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 93 GQKNLCNNTGD--PEMCPENGSCVPDGPGLLQCVCADGFHGYKC 134
G K++ N G+ C G+CVP G C C GF G +C
Sbjct: 1300 GSKDIGNVPGNCSENPCQNGGTCVP-GADAHSCDCGPGFKGRRC 1342
Score = 26.9 bits (58), Expect = 8.6
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 60 QLQTLILPQHVN--CPGGINAWNTITSYIDNQICQGQKNLCNNTGDP---EMCPENGSCV 114
+ + +P ++N CP G SY+ +C N ++ P + C GSC
Sbjct: 500 EFEITAMPCNMNTQCPDGGYCMEHGGSYLC--VCHTDHNASHSLPSPCDSDPCFNGGSCD 557
Query: 115 PDGPGLLQCVCADGFHGYKC 134
C C GFHG C
Sbjct: 558 AHDDSYT-CECPRGFHGKHC 576
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,971,995
Number of Sequences: 37866
Number of extensions: 392485
Number of successful extensions: 1202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 875
Number of HSP's gapped (non-prelim): 387
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.