Guide to the Human Genome
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Name: DLK2 Sequence: fasta or formatted (383aa) NCBI GI: 45545431
Description:

EGF-like-domain, multiple 9

Referenced in:

Notch Pathway

Other entries for this name:
alt mRNA [383aa] EGF-like-domain, multiple 9
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         31           2
 C cysteine           12.0         46           2
 D aspartate           6.0         23           2
 E glutamate           3.7         14           1
 F phenylalanine       2.6         10           1
 G glycine            11.5         44           3
 H histidine           3.4         13           1
 I isoleucine          1.6          6           1
 K lysine              1.6          6           1
 L leucine             8.9         34           2
 M methionine          1.3          5           1
 N asparagine          1.8          7           1
 P proline             9.7         37           2
 Q glutamine           4.2         16           1
 R arginine            6.5         25           2
 S serine              3.9         15           2
 T threonine           4.4         17           2
 V valine              6.5         25           3
 W tryptophan          1.0          4           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EGF-like-domain, multiple 9 
DLK2                  1.000   EGF-like-domain, multiple 9 
DLL1                  0.264   delta-like 1 
DLK1                  0.259   delta-like 1 homolog 
JAG2                  0.258   jagged 2 isoform b precursor 
DLL4                  0.242   delta-like 4 protein precursor 
JAG2                  0.242   jagged 2 isoform a precursor 
JAG1                  0.240   jagged 1 precursor 
NOTCH2                0.217   notch 2 preproprotein 
NOTCH1                0.203   notch1 preproprotein 
NOTCH3                0.193   Notch homolog 3 
SVEP1                 0.192   polydom 
CRB1                  0.191   crumbs homolog 1 precursor 
DLL3                  0.182   delta-like 3 protein isoform 1 precursor 
DLL3                  0.182   delta-like 3 protein isoform 2 precursor 
CRB2                  0.173   crumbs homolog 2 
NOTCH4                0.167   notch4 preproprotein 
SLIT2                 0.152   slit homolog 2 
SLIT1                 0.150   slit homolog 1 
SNED1                 0.149   6720455I24Rik homolog 
EYS                   0.146   eyes shut homolog isoform 1 
SLIT3                 0.135   slit homolog 3 
DNER                  0.132   delta-notch-like EGF repeat-containing transmembran...
PEAR1                 0.121   platelet endothelial aggregation receptor 1 
NOTCH2NL              0.120   Notch homolog 2 N-terminal like protein 
FAT4                  0.115   FAT tumor suppressor homolog 4 
FAT1                  0.115   FAT tumor suppressor 1 precursor 
VWDE                  0.107   von Willebrand factor D and EGF domains 
TNXB                  0.098   tenascin XB isoform 1 precursor 
TNC                   0.094   tenascin C precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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