Guide to the Human Genome
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Name: PROC Sequence: fasta or formatted (461aa) NCBI GI: 4506115
Description:

protein C

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         24           2
 C cysteine            5.2         24           2
 D aspartate           6.5         30           2
 E glutamate           7.4         34           2
 F phenylalanine       3.3         15           1
 G glycine             7.6         35           2
 H histidine           3.9         18           1
 I isoleucine          3.9         18           1
 K lysine              5.2         24           3
 L leucine            10.6         49           3
 M methionine          1.7          8           1
 N asparagine          2.8         13           1
 P proline             4.3         20           1
 Q glutamine           3.3         15           1
 R arginine            6.1         28           2
 S serine              7.8         36           3
 T threonine           3.9         18           2
 V valine              6.3         29           2
 W tryptophan          3.3         15           1
 Y tyrosine            1.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein C 
F7                    0.300   coagulation factor VII isoform b precursor 
F10                   0.299   coagulation factor X preproprotein 
F7                    0.299   coagulation factor VII isoform a precursor 
F9                    0.271   coagulation factor IX preproprotein 
F2                    0.161   coagulation factor II preproprotein 
PROZ                  0.160   protein Z, vitamin K-dependent plasma glycoprotein [H...
TMPRSS6               0.152   transmembrane protease, serine 6 
KLKB1                 0.140   plasma kallikrein B1 precursor 
HGFAC                 0.138   HGF activator preproprotein 
TPSB2                 0.136   tryptase beta 2 precursor 
F11                   0.136   coagulation factor XI precursor 
MASP1                 0.134   mannan-binding lectin serine protease 1 isoform 1 pr...
TPSAB1                0.134   tryptase alpha/beta 1 precursor 
KLK14                 0.133   kallikrein 14 preproprotein 
PRSS12                0.133   neurotrypsin precursor 
CTRL                  0.133   chymotrypsin-like 
TMPRSS2               0.132   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.132   transmembrane protease, serine 2 isoform 2 
TMPRSS7               0.127   transmembrane protease, serine 7 
KLK6                  0.127   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.127   kallikrein-related peptidase 6 isoform A preproprotei...
KLK13                 0.127   kallikrein 13 precursor 
PRSS33                0.126   protease, serine, 33 
PLG                   0.125   plasminogen 
KLK11                 0.124   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.124   kallikrein 11 isoform 2 precursor 
KLK11                 0.124   kallikrein 11 isoform 1 preproprotein 
PRSS8                 0.124   prostasin preproprotein 
TMPRSS9               0.124   transmembrane protease, serine 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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