Guide to the Human Genome
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Name: LRRC3 Sequence: fasta or formatted (257aa) NCBI GI: 13562088
Description:

leucine-rich repeat-containing 3 precursor

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         27           2
 C cysteine            3.9         10           1
 D aspartate           5.4         14           1
 E glutamate           5.1         13           2
 F phenylalanine       3.1          8           1
 G glycine             5.8         15           2
 H histidine           4.7         12           1
 I isoleucine          3.9         10           1
 K lysine              3.5          9           1
 L leucine            14.8         38           3
 M methionine          1.6          4           1
 N asparagine          2.3          6           1
 P proline             7.4         19           2
 Q glutamine           3.1          8           1
 R arginine            5.8         15           2
 S serine              6.6         17           1
 T threonine           3.1          8           2
 V valine              6.6         17           2
 W tryptophan          0.8          2           1
 Y tyrosine            1.9          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-rich repeat-containing 3 precursor 
LRRC3B                0.415   leucine rich repeat containing 3B 
LOC728129             0.285   PREDICTED: similar to hCG2044133 
LOC728129             0.285   PREDICTED: similar to hCG2044133 
LOC728129             0.285   PREDICTED: hypothetical protein LOC728129 
ISLR2                 0.118   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.118   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.118   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.118   immunoglobulin superfamily containing leucine-rich ...
ISLR                  0.118   immunoglobulin superfamily containing leucine-rich r...
ISLR                  0.118   immunoglobulin superfamily containing leucine-rich re...
CHADL                 0.094   chondroadherin-like 
LGR6                  0.094   leucine-rich repeat-containing G protein-coupled rec...
LRRC4                 0.092   leucine rich repeat containing 4 
AMIGO3                0.090   adhesion molecule with Ig-like domain 3 
LGR4                  0.086   leucine-rich repeat-containing G protein-coupled re...
SLIT2                 0.084   slit homolog 2 
LRRC4B                0.084   leucine rich repeat containing 4B 
LRRC4C                0.084   netrin-G1 ligand 
LRTM2                 0.084   leucine-rich repeats and transmembrane domains 2 [Ho...
LINGO3                0.084   leucine rich repeat and Ig domain containing 3 [Hom...
LRRC55                0.084   leucine rich repeat containing 55 
LRFN4                 0.084   leucine rich repeat and fibronectin type III domain ...
DCN                   0.082   decorin isoform a preproprotein 
DCN                   0.082   decorin isoform a preproprotein 
LRRC24                0.080   leucine rich repeat containing 24 
SLIT3                 0.080   slit homolog 3 
IGFALS                0.080   insulin-like growth factor binding protein, acid la...
IGFALS                0.080   insulin-like growth factor binding protein, acid labi...
SLIT1                 0.078   slit homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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