Guide to the Human Genome
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Name: WIF1 Sequence: fasta or formatted (379aa) NCBI GI: 111125011
Description:

WNT inhibitory factor 1 precursor

Referenced in:

Epidermal Growth Factor
Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         30           3
 C cysteine            8.7         33           1
 D aspartate           2.9         11           1
 E glutamate           6.3         24           2
 F phenylalanine       4.5         17           2
 G glycine             9.8         37           2
 H histidine           3.2         12           1
 I isoleucine          4.7         18           1
 K lysine              5.3         20           2
 L leucine             6.9         26           2
 M methionine          1.8          7           1
 N asparagine          4.2         16           1
 P proline             7.9         30           2
 Q glutamine           5.0         19           2
 R arginine            4.7         18           2
 S serine              4.5         17           1
 T threonine           3.7         14           2
 V valine              4.2         16           2
 W tryptophan          1.6          6           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WNT inhibitory factor 1 precursor 
VWDE                  0.195   von Willebrand factor D and EGF domains 
ODZ2                  0.129   odz, odd Oz/ten-m homolog 2 
TNC                   0.128   tenascin C precursor 
TNXB                  0.125   tenascin XB isoform 1 precursor 
ODZ3                  0.120   odz, odd Oz/ten-m homolog 3 
ODZ4                  0.118   odz, odd Oz/ten-m homolog 4 
SNED1                 0.108   6720455I24Rik homolog 
DLL4                  0.107   delta-like 4 protein precursor 
JAG1                  0.105   jagged 1 precursor 
NOTCH1                0.104   notch1 preproprotein 
TNR                   0.104   tenascin R 
MEGF10                0.103   multiple EGF-like-domains 10 
ODZ1                  0.103   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.103   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.103   odz, odd Oz/ten-m homolog 1 isoform 1 
DLL1                  0.102   delta-like 1 
SVEP1                 0.102   polydom 
DLL3                  0.102   delta-like 3 protein isoform 1 precursor 
DLL3                  0.102   delta-like 3 protein isoform 2 precursor 
DLK1                  0.100   delta-like 1 homolog 
MEGF11                0.100   multiple EGF-like-domains 11 
LRP1B                 0.099   low density lipoprotein-related protein 1B precursor...
NOTCH3                0.093   Notch homolog 3 
NOTCH2                0.092   notch 2 preproprotein 
JAG2                  0.092   jagged 2 isoform b precursor 
JAG2                  0.092   jagged 2 isoform a precursor 
DLK2                  0.092   EGF-like-domain, multiple 9 
DLK2                  0.092   EGF-like-domain, multiple 9 
LRP1                  0.090   low density lipoprotein-related protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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