ITGBL1 30727

Name: ITGBL1	Sequence: fasta or formatted (494aa)		NCBI GI: 4758614
Description: integrin, beta-like 1 (with EGF-like repeat domains)		Referenced in: Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.8 19 2 C cysteine 16.2 80 1 D aspartate 8.3 41 2 E glutamate 6.5 32 2 F phenylalanine 2.2 11 2 G glycine 12.8 63 2 H histidine 3.0 15 1 I isoleucine 3.0 15 2 K lysine 5.5 27 3 L leucine 4.0 20 3 M methionine 0.8 4 1 N asparagine 3.0 15 1 P proline 4.0 20 2 Q glutamine 2.4 12 1 R arginine 5.9 29 2 S serine 7.1 35 2 T threonine 3.8 19 1 V valine 2.4 12 2 W tryptophan 2.4 12 1 Y tyrosine 2.6 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 integrin, beta-like 1 (with EGF-like repeat domains) ... TNXB 0.148 tenascin XB isoform 1 precursor TNC 0.119 tenascin C precursor ITGB3 0.111 integrin beta chain, beta 3 precursor ODZ1 0.105 odz, odd Oz/ten-m homolog 1 isoform 3 ODZ1 0.105 odz, odd Oz/ten-m homolog 1 isoform 2 ODZ1 0.105 odz, odd Oz/ten-m homolog 1 isoform 1 ITGB4 0.101 integrin beta 4 isoform 2 precursor ITGB4 0.101 integrin beta 4 isoform 1 precursor ITGB4 0.101 integrin beta 4 isoform 3 precursor ODZ4 0.100 odz, odd Oz/ten-m homolog 4 ITGB6 0.100 integrin, beta 6 ODZ3 0.100 odz, odd Oz/ten-m homolog 3 ODZ2 0.097 odz, odd Oz/ten-m homolog 2 ITGB2 0.094 integrin, beta 2 precursor ITGB2 0.094 integrin, beta 2 precursor ITGB5 0.093 integrin, beta 5 MEGF6 0.090 EGF-like-domain, multiple 3 ITGB1 0.089 integrin beta 1 isoform 1C-1 precursor ITGB1 0.089 integrin beta 1 isoform 1B precursor ITGB1 0.089 integrin beta 1 isoform 1A precursor ITGB1 0.089 integrin beta 1 isoform 1A precursor ITGB1 0.089 integrin beta 1 isoform 1C-2 precursor ITGB1 0.089 integrin beta 1 isoform 1D precursor ITGB8 0.084 integrin, beta 8 precursor MEGF10 0.083 multiple EGF-like-domains 10 ITGB7 0.080 integrin, beta 7 MEGF11 0.079 multiple EGF-like-domains 11 PEAR1 0.079 platelet endothelial aggregation receptor 1 NOTCH1 0.070 notch1 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.