PCDH24 9322

Name: PCDH24	Sequence: fasta or formatted (1310aa)		NCBI GI: 16933559
Description: protocadherin LKC precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 104 2 C cysteine 0.9 12 1 D aspartate 7.6 99 3 E glutamate 5.0 66 3 F phenylalanine 3.7 48 2 G glycine 6.4 84 2 H histidine 1.2 16 1 I isoleucine 4.7 62 2 K lysine 2.4 31 1 L leucine 9.9 130 3 M methionine 1.5 19 1 N asparagine 5.8 76 2 P proline 5.6 73 2 Q glutamine 4.4 57 1 R arginine 3.4 45 1 S serine 8.6 113 3 T threonine 6.5 85 3 V valine 10.8 141 3 W tryptophan 0.7 9 1 Y tyrosine 3.1 40 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin LKC precursor CDH23 0.117 cadherin-like 23 isoform 1 precursor FAT4 0.095 FAT tumor suppressor homolog 4 PCDH21 0.094 protocadherin 21 precursor FAT1 0.090 FAT tumor suppressor 1 precursor FAT3 0.083 FAT tumor suppressor homolog 3 CELSR2 0.081 cadherin EGF LAG seven-pass G-type receptor 2 DCHS1 0.078 dachsous 1 precursor CELSR3 0.074 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... DCHS2 0.074 dachsous 2 isoform 1 CDH23 0.074 cadherin-like 23 isoform 2 precursor FAT2 0.072 FAT tumor suppressor 2 precursor CELSR1 0.069 cadherin EGF LAG seven-pass G-type receptor 1 PCDH9 0.060 protocadherin 9 isoform 2 precursor PCDH9 0.060 protocadherin 9 isoform 1 precursor DCHS2 0.060 dachsous 2 isoform 2 PCDH18 0.058 protocadherin 18 precursor PCDH11X 0.058 protocadherin 11 X-linked isoform a precursor PCDH11X 0.058 protocadherin 11 X-linked isoform d PCDH11X 0.058 protocadherin 11 X-linked isoform c PCDH11X 0.058 protocadherin 11 X-linked isoform b precursor PCDH15 0.058 protocadherin 15 isoform CD2-1 precursor PCDH1 0.058 protocadherin 1 isoform 2 precursor PCDH1 0.058 protocadherin 1 isoform 1 precursor PCDH15 0.057 protocadherin 15 isoform CD1-4 precursor PCDH15 0.057 protocadherin 15 isoform CD1-10 precursor PCDH15 0.057 protocadherin 15 isoform CD3-2 precursor PCDH15 0.057 protocadherin 15 isoform CD3-1 precursor PCDH15 0.057 protocadherin 15 isoform CD2-2 precursor PCDH15 0.057 protocadherin 15 isoform CD1-9 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.