PCDH15 13784

Name: PCDH15	Sequence: fasta or formatted (1682aa)		NCBI GI: 218505791
Description: protocadherin 15 isoform CD3-1 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions
Other entries for this name: alt prot [1955aa] protocadherin 15 isoform CD1-4 precursor alt prot [1962aa] protocadherin 15 isoform CD1-1 precursor alt prot [1957aa] protocadherin 15 isoform CD1-2 precursor alt prot [1886aa] protocadherin 15 isoform CD1-6 precursor alt prot [1952aa] protocadherin 15 isoform CD1-7 precursor alt prot [1915aa] protocadherin 15 isoform CD1-8 precursor alt prot [1935aa] protocadherin 15 isoform CD1-9 precursor alt prot [1790aa] protocadherin 15 isoform CD2-1 precursor alt prot [1539aa] protocadherin 15 isoform CD2-2 precursor alt prot [1677aa] protocadherin 15 isoform CD3-2 precursor alt prot [1932aa] protocadherin 15 isoform CD1-10 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 109 3 C cysteine 0.8 14 2 D aspartate 6.9 116 3 E glutamate 6.8 115 4 F phenylalanine 3.5 59 2 G glycine 5.9 99 2 H histidine 1.6 27 2 I isoleucine 7.1 119 3 K lysine 3.9 65 2 L leucine 8.2 138 2 M methionine 1.8 31 1 N asparagine 5.2 87 2 P proline 7.2 121 9 Q glutamine 3.4 57 2 R arginine 5.1 86 3 S serine 5.4 91 3 T threonine 7.6 127 5 V valine 8.7 146 3 W tryptophan 0.4 6 1 Y tyrosine 4.1 69 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 15 isoform CD3-1 precursor PCDH15 0.994 protocadherin 15 isoform CD3-2 precursor PCDH15 0.887 protocadherin 15 isoform CD2-1 precursor PCDH15 0.866 protocadherin 15 isoform CD1-1 precursor PCDH15 0.860 protocadherin 15 isoform CD2-2 precursor PCDH15 0.860 protocadherin 15 isoform CD1-2 precursor PCDH15 0.859 protocadherin 15 isoform CD1-4 precursor PCDH15 0.855 protocadherin 15 isoform CD1-7 precursor PCDH15 0.844 protocadherin 15 isoform CD1-9 precursor PCDH15 0.841 protocadherin 15 isoform CD1-10 precursor PCDH15 0.828 protocadherin 15 isoform CD1-8 precursor PCDH15 0.472 protocadherin 15 isoform CD1-6 precursor FAT4 0.095 FAT tumor suppressor homolog 4 FAT3 0.090 FAT tumor suppressor homolog 3 FAT1 0.087 FAT tumor suppressor 1 precursor CELSR2 0.080 cadherin EGF LAG seven-pass G-type receptor 2 DCHS1 0.080 dachsous 1 precursor CDH23 0.079 cadherin-like 23 isoform 1 precursor DCHS2 0.077 dachsous 2 isoform 1 CELSR3 0.076 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... CELSR1 0.073 cadherin EGF LAG seven-pass G-type receptor 1 FAT2 0.072 FAT tumor suppressor 2 precursor DCHS2 0.059 dachsous 2 isoform 2 PCDH9 0.054 protocadherin 9 isoform 2 precursor PCDH9 0.054 protocadherin 9 isoform 1 precursor PCDH11Y 0.052 protocadherin 11 Y-linked isoform c PCDH11Y 0.052 protocadherin 11 Y-linked isoform b PCDH11Y 0.052 protocadherin 11 Y-linked isoform a PCDH11X 0.051 protocadherin 11 X-linked isoform a precursor PCDH11X 0.051 protocadherin 11 X-linked isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.