Name: FAT1 | Sequence: fasta or formatted (4588aa) | NCBI GI: 66346693 | |
Description: FAT tumor suppressor 1 precursor
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Referenced in: Cadherins and Related Proteins
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.0 277 2 C cysteine 1.3 60 2 D aspartate 7.1 327 2 E glutamate 6.9 315 2 F phenylalanine 4.0 183 3 G glycine 6.0 273 3 H histidine 2.8 130 2 I isoleucine 6.1 280 2 K lysine 4.7 216 3 L leucine 7.3 335 8 M methionine 1.3 58 2 N asparagine 4.8 222 2 P proline 5.5 254 5 Q glutamine 3.6 164 2 R arginine 3.7 170 2 S serine 8.8 402 3 T threonine 7.0 321 3 V valine 9.1 417 4 W tryptophan 0.4 20 1 Y tyrosine 3.6 164 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 FAT tumor suppressor 1 precursor FAT3 0.505 FAT tumor suppressor homolog 3 FAT2 0.385 FAT tumor suppressor 2 precursor FAT4 0.133 FAT tumor suppressor homolog 4 DCHS1 0.098 dachsous 1 precursor CDH23 0.095 cadherin-like 23 isoform 1 precursor DCHS2 0.076 dachsous 2 isoform 1 CELSR2 0.052 cadherin EGF LAG seven-pass G-type receptor 2 CELSR3 0.049 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... CELSR1 0.047 cadherin EGF LAG seven-pass G-type receptor 1 DCHS2 0.036 dachsous 2 isoform 2 PCDH15 0.032 protocadherin 15 isoform CD1-4 precursor PCDH15 0.032 protocadherin 15 isoform CD1-10 precursor PCDH15 0.032 protocadherin 15 isoform CD3-2 precursor PCDH15 0.032 protocadherin 15 isoform CD3-1 precursor PCDH15 0.032 protocadherin 15 isoform CD2-2 precursor PCDH15 0.032 protocadherin 15 isoform CD1-9 precursor PCDH15 0.032 protocadherin 15 isoform CD1-7 precursor PCDH15 0.032 protocadherin 15 isoform CD1-2 precursor PCDH15 0.032 protocadherin 15 isoform CD1-1 precursor PCDH15 0.031 protocadherin 15 isoform CD2-1 precursor PCDH15 0.030 protocadherin 15 isoform CD1-8 precursor PCDH11Y 0.029 protocadherin 11 Y-linked isoform c PCDH11Y 0.029 protocadherin 11 Y-linked isoform b PCDH11Y 0.029 protocadherin 11 Y-linked isoform a PCDH11X 0.029 protocadherin 11 X-linked isoform a precursor PCDH11X 0.029 protocadherin 11 X-linked isoform d PCDH11X 0.029 protocadherin 11 X-linked isoform c PCDH11X 0.029 protocadherin 11 X-linked isoform b precursor PCDH1 0.028 protocadherin 1 isoform 2 precursorHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.