PCDH11X 4176

Name: PCDH11X	Sequence: fasta or formatted (1347aa)		NCBI GI: 14589920
Description: protocadherin 11 X-linked isoform c		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1025aa] protocadherin 11 X-linked isoform b precursor alt prot [1337aa] protocadherin 11 X-linked isoform d alt prot [1021aa] protocadherin 11 X-linked isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 89 3 C cysteine 1.5 20 1 D aspartate 6.8 91 2 E glutamate 5.9 79 2 F phenylalanine 3.3 45 1 G glycine 4.5 61 2 H histidine 2.7 37 2 I isoleucine 6.2 84 2 K lysine 4.9 66 8 L leucine 7.9 107 3 M methionine 1.6 22 2 N asparagine 5.5 74 2 P proline 7.4 100 3 Q glutamine 4.2 56 2 R arginine 3.4 46 2 S serine 8.7 117 5 T threonine 7.6 102 2 V valine 8.6 116 4 W tryptophan 0.4 5 1 Y tyrosine 2.2 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 11 X-linked isoform c PCDH11X 0.990 protocadherin 11 X-linked isoform d PCDH11Y 0.939 protocadherin 11 Y-linked isoform c PCDH11X 0.743 protocadherin 11 X-linked isoform a precursor PCDH11X 0.743 protocadherin 11 X-linked isoform b precursor PCDH11Y 0.726 protocadherin 11 Y-linked isoform b PCDH11Y 0.726 protocadherin 11 Y-linked isoform a PCDH9 0.476 protocadherin 9 isoform 1 precursor PCDH9 0.473 protocadherin 9 isoform 2 precursor PCDH1 0.250 protocadherin 1 isoform 2 precursor PCDH1 0.239 protocadherin 1 isoform 1 precursor PCDH20 0.226 protocadherin 20 PCDH7 0.218 protocadherin 7 isoform b precursor PCDH7 0.218 protocadherin 7 isoform a precursor PCDH7 0.216 protocadherin 7 isoform c precursor PCDHGA10 0.127 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.127 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH18 0.125 protocadherin 18 precursor PCDHGA12 0.125 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.125 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDH17 0.124 protocadherin 17 precursor PCDH19 0.123 protocadherin 19 isoform a PCDH19 0.123 protocadherin 19 isoform b PCDHGA7 0.122 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.122 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB1 0.122 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.122 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDH10 0.121 protocadherin 10 isoform 1 precursor PCDH10 0.121 protocadherin 10 isoform 2 precursor PCDHGA11 0.120 protocadherin gamma subfamily A, 11 isoform 2 precur... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.