PCDH15 13782

Name: PCDH15	Sequence: fasta or formatted (1790aa)		NCBI GI: 218505787
Description: protocadherin 15 isoform CD2-1 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions
Other entries for this name: alt prot [1955aa] protocadherin 15 isoform CD1-4 precursor alt prot [1962aa] protocadherin 15 isoform CD1-1 precursor alt prot [1957aa] protocadherin 15 isoform CD1-2 precursor alt prot [1886aa] protocadherin 15 isoform CD1-6 precursor alt prot [1952aa] protocadherin 15 isoform CD1-7 precursor alt prot [1915aa] protocadherin 15 isoform CD1-8 precursor alt prot [1935aa] protocadherin 15 isoform CD1-9 precursor alt prot [1539aa] protocadherin 15 isoform CD2-2 precursor alt prot [1682aa] protocadherin 15 isoform CD3-1 precursor alt prot [1677aa] protocadherin 15 isoform CD3-2 precursor alt prot [1932aa] protocadherin 15 isoform CD1-10 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 114 3 C cysteine 0.6 11 2 D aspartate 6.5 116 3 E glutamate 9.9 178 6 F phenylalanine 3.2 58 2 G glycine 6.0 107 2 H histidine 1.2 21 1 I isoleucine 6.6 119 3 K lysine 4.1 74 2 L leucine 7.3 130 2 M methionine 1.6 29 1 N asparagine 4.4 78 2 P proline 7.3 131 9 Q glutamine 3.4 61 2 R arginine 4.9 87 3 S serine 6.5 117 6 T threonine 7.2 128 5 V valine 8.4 151 3 W tryptophan 0.3 6 1 Y tyrosine 4.1 74 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 15 isoform CD2-1 precursor PCDH15 0.837 protocadherin 15 isoform CD3-1 precursor PCDH15 0.832 protocadherin 15 isoform CD3-2 precursor PCDH15 0.816 protocadherin 15 isoform CD1-1 precursor PCDH15 0.810 protocadherin 15 isoform CD2-2 precursor PCDH15 0.810 protocadherin 15 isoform CD1-2 precursor PCDH15 0.809 protocadherin 15 isoform CD1-4 precursor PCDH15 0.806 protocadherin 15 isoform CD1-7 precursor PCDH15 0.795 protocadherin 15 isoform CD1-9 precursor PCDH15 0.792 protocadherin 15 isoform CD1-10 precursor PCDH15 0.780 protocadherin 15 isoform CD1-8 precursor PCDH15 0.446 protocadherin 15 isoform CD1-6 precursor FAT4 0.089 FAT tumor suppressor homolog 4 FAT3 0.084 FAT tumor suppressor homolog 3 FAT1 0.081 FAT tumor suppressor 1 precursor CDH23 0.079 cadherin-like 23 isoform 1 precursor DCHS1 0.075 dachsous 1 precursor CELSR2 0.075 cadherin EGF LAG seven-pass G-type receptor 2 CELSR3 0.071 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... DCHS2 0.070 dachsous 2 isoform 1 FAT2 0.068 FAT tumor suppressor 2 precursor CELSR1 0.068 cadherin EGF LAG seven-pass G-type receptor 1 DCHS2 0.056 dachsous 2 isoform 2 PCDH9 0.051 protocadherin 9 isoform 2 precursor PCDH9 0.051 protocadherin 9 isoform 1 precursor PCDH11Y 0.048 protocadherin 11 Y-linked isoform c PCDH11Y 0.048 protocadherin 11 Y-linked isoform b PCDH11Y 0.048 protocadherin 11 Y-linked isoform a PCDH11X 0.047 protocadherin 11 X-linked isoform a precursor PCDH11X 0.047 protocadherin 11 X-linked isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.