PCDH11X 4175

Name: PCDH11X	Sequence: fasta or formatted (1025aa)		NCBI GI: 14589918
Description: protocadherin 11 X-linked isoform b precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1347aa] protocadherin 11 X-linked isoform c alt prot [1337aa] protocadherin 11 X-linked isoform d alt prot [1021aa] protocadherin 11 X-linked isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 60 2 C cysteine 1.2 12 1 D aspartate 7.6 78 2 E glutamate 6.2 64 2 F phenylalanine 3.9 40 1 G glycine 4.1 42 2 H histidine 1.8 18 2 I isoleucine 7.2 74 2 K lysine 5.7 58 8 L leucine 8.1 83 3 M methionine 1.6 16 2 N asparagine 6.9 71 2 P proline 6.4 66 2 Q glutamine 2.7 28 1 R arginine 3.4 35 2 S serine 6.9 71 5 T threonine 8.0 82 2 V valine 9.8 100 4 W tryptophan 0.2 2 1 Y tyrosine 2.4 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 11 X-linked isoform b precursor PCDH11X 0.987 protocadherin 11 X-linked isoform a precursor PCDH11X 0.987 protocadherin 11 X-linked isoform d PCDH11X 0.987 protocadherin 11 X-linked isoform c PCDH11Y 0.970 protocadherin 11 Y-linked isoform b PCDH11Y 0.970 protocadherin 11 Y-linked isoform a PCDH11Y 0.966 protocadherin 11 Y-linked isoform c PCDH9 0.577 protocadherin 9 isoform 1 precursor PCDH9 0.577 protocadherin 9 isoform 2 precursor PCDH1 0.317 protocadherin 1 isoform 2 precursor PCDH1 0.316 protocadherin 1 isoform 1 precursor PCDH20 0.300 protocadherin 20 PCDH7 0.289 protocadherin 7 isoform b precursor PCDH7 0.289 protocadherin 7 isoform a precursor PCDH7 0.280 protocadherin 7 isoform c precursor PCDHGA10 0.169 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.169 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH18 0.166 protocadherin 18 precursor PCDHGA12 0.165 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.165 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDH17 0.164 protocadherin 17 precursor PCDH19 0.163 protocadherin 19 isoform a PCDH19 0.163 protocadherin 19 isoform b PCDHGA7 0.162 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.162 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB1 0.161 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.161 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDH10 0.161 protocadherin 10 isoform 1 precursor PCDH10 0.161 protocadherin 10 isoform 2 precursor PCDHGA11 0.160 protocadherin gamma subfamily A, 11 isoform 2 precur... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.