PCDH9 37851

Name: PCDH9	Sequence: fasta or formatted (1203aa)		NCBI GI: 9966883
Description: protocadherin 9 isoform 2 precursor		Referenced in: Cadherins and Related Proteins Gene Structure
Other entries for this name: alt prot [1237aa] protocadherin 9 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 74 2 C cysteine 0.9 11 1 D aspartate 7.0 84 2 E glutamate 5.8 70 2 F phenylalanine 4.0 48 2 G glycine 5.7 69 2 H histidine 2.2 27 2 I isoleucine 6.1 73 2 K lysine 5.7 69 4 L leucine 7.8 94 2 M methionine 1.0 12 1 N asparagine 6.5 78 2 P proline 6.7 81 2 Q glutamine 3.9 47 2 R arginine 4.0 48 2 S serine 8.6 103 3 T threonine 7.0 84 2 V valine 8.0 96 2 W tryptophan 0.5 6 1 Y tyrosine 2.4 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 9 isoform 2 precursor PCDH9 0.992 protocadherin 9 isoform 1 precursor PCDH11Y 0.534 protocadherin 11 Y-linked isoform c PCDH11X 0.532 protocadherin 11 X-linked isoform d PCDH11X 0.529 protocadherin 11 X-linked isoform c PCDH11X 0.486 protocadherin 11 X-linked isoform b precursor PCDH11X 0.486 protocadherin 11 X-linked isoform a precursor PCDH11Y 0.483 protocadherin 11 Y-linked isoform b PCDH11Y 0.483 protocadherin 11 Y-linked isoform a PCDH1 0.304 protocadherin 1 isoform 2 precursor PCDH7 0.287 protocadherin 7 isoform c precursor PCDH1 0.283 protocadherin 1 isoform 1 precursor PCDH7 0.282 protocadherin 7 isoform a precursor PCDH7 0.281 protocadherin 7 isoform b precursor PCDH20 0.265 protocadherin 20 PCDH18 0.150 protocadherin 18 precursor PCDHGA10 0.146 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.146 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH17 0.145 protocadherin 17 precursor PCDH19 0.145 protocadherin 19 isoform a PCDH19 0.145 protocadherin 19 isoform b PCDHGA7 0.144 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.144 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDH10 0.142 protocadherin 10 isoform 1 precursor PCDH10 0.142 protocadherin 10 isoform 2 precursor PCDHGA12 0.142 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.142 protocadherin gamma subfamily A, 12 isoform 2 precur... FAT4 0.138 FAT tumor suppressor homolog 4 PCDHGA3 0.138 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.138 protocadherin gamma subfamily A, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.