PCDH15 13783

Name: PCDH15	Sequence: fasta or formatted (1539aa)		NCBI GI: 218505789
Description: protocadherin 15 isoform CD2-2 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions
Other entries for this name: alt prot [1955aa] protocadherin 15 isoform CD1-4 precursor alt prot [1962aa] protocadherin 15 isoform CD1-1 precursor alt prot [1957aa] protocadherin 15 isoform CD1-2 precursor alt prot [1886aa] protocadherin 15 isoform CD1-6 precursor alt prot [1952aa] protocadherin 15 isoform CD1-7 precursor alt prot [1915aa] protocadherin 15 isoform CD1-8 precursor alt prot [1935aa] protocadherin 15 isoform CD1-9 precursor alt prot [1790aa] protocadherin 15 isoform CD2-1 precursor alt prot [1682aa] protocadherin 15 isoform CD3-1 precursor alt prot [1677aa] protocadherin 15 isoform CD3-2 precursor alt prot [1932aa] protocadherin 15 isoform CD1-10 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 99 3 C cysteine 0.8 13 2 D aspartate 7.1 109 3 E glutamate 5.9 91 3 F phenylalanine 3.6 55 2 G glycine 5.8 89 2 H histidine 1.4 21 1 I isoleucine 7.4 114 3 K lysine 4.1 63 2 L leucine 8.5 131 2 M methionine 2.1 32 1 N asparagine 5.1 79 2 P proline 7.0 107 9 Q glutamine 3.4 53 2 R arginine 5.4 83 2 S serine 5.2 80 3 T threonine 7.4 114 5 V valine 9.0 138 3 W tryptophan 0.3 4 1 Y tyrosine 4.2 64 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 15 isoform CD2-2 precursor PCDH15 0.947 protocadherin 15 isoform CD3-2 precursor PCDH15 0.946 protocadherin 15 isoform CD1-2 precursor PCDH15 0.945 protocadherin 15 isoform CD3-1 precursor PCDH15 0.945 protocadherin 15 isoform CD1-4 precursor PCDH15 0.944 protocadherin 15 isoform CD1-1 precursor PCDH15 0.942 protocadherin 15 isoform CD2-1 precursor PCDH15 0.941 protocadherin 15 isoform CD1-7 precursor PCDH15 0.928 protocadherin 15 isoform CD1-9 precursor PCDH15 0.924 protocadherin 15 isoform CD1-10 precursor PCDH15 0.911 protocadherin 15 isoform CD1-8 precursor PCDH15 0.518 protocadherin 15 isoform CD1-6 precursor FAT4 0.105 FAT tumor suppressor homolog 4 FAT3 0.098 FAT tumor suppressor homolog 3 FAT1 0.095 FAT tumor suppressor 1 precursor CELSR2 0.088 cadherin EGF LAG seven-pass G-type receptor 2 DCHS1 0.087 dachsous 1 precursor CDH23 0.087 cadherin-like 23 isoform 1 precursor DCHS2 0.084 dachsous 2 isoform 1 CELSR3 0.083 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... CELSR1 0.080 cadherin EGF LAG seven-pass G-type receptor 1 FAT2 0.079 FAT tumor suppressor 2 precursor DCHS2 0.064 dachsous 2 isoform 2 PCDH9 0.060 protocadherin 9 isoform 2 precursor PCDH9 0.060 protocadherin 9 isoform 1 precursor PCDH11Y 0.057 protocadherin 11 Y-linked isoform c PCDH11Y 0.057 protocadherin 11 Y-linked isoform b PCDH11Y 0.057 protocadherin 11 Y-linked isoform a PCDH11X 0.056 protocadherin 11 X-linked isoform a precursor PCDH11X 0.056 protocadherin 11 X-linked isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.