CDH23 6787

Name: CDH23	Sequence: fasta or formatted (530aa)		NCBI GI: 16507964
Description: cadherin-like 23 isoform 2 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions PDZ Domain
Other entries for this name: alt prot [3354aa] cadherin-like 23 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 26 1 C cysteine 0.8 4 1 D aspartate 7.2 38 2 E glutamate 4.5 24 2 F phenylalanine 5.3 28 2 G glycine 6.2 33 2 H histidine 2.3 12 2 I isoleucine 7.4 39 3 K lysine 1.7 9 1 L leucine 8.7 46 2 M methionine 0.8 4 1 N asparagine 6.2 33 2 P proline 6.8 36 2 Q glutamine 3.8 20 1 R arginine 4.5 24 2 S serine 7.2 38 2 T threonine 8.3 44 3 V valine 9.6 51 2 W tryptophan 0.6 3 1 Y tyrosine 3.4 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin-like 23 isoform 2 precursor CDH23 0.904 cadherin-like 23 isoform 1 precursor PCDH24 0.180 protocadherin LKC precursor PCDH21 0.179 protocadherin 21 precursor CELSR2 0.179 cadherin EGF LAG seven-pass G-type receptor 2 FAT4 0.176 FAT tumor suppressor homolog 4 FAT1 0.164 FAT tumor suppressor 1 precursor FAT2 0.160 FAT tumor suppressor 2 precursor FAT3 0.159 FAT tumor suppressor homolog 3 CELSR3 0.155 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... CELSR1 0.151 cadherin EGF LAG seven-pass G-type receptor 1 DCHS1 0.137 dachsous 1 precursor PCDH19 0.125 protocadherin 19 isoform a PCDH19 0.125 protocadherin 19 isoform b DCHS2 0.122 dachsous 2 isoform 1 PCDH18 0.122 protocadherin 18 precursor PCDH11Y 0.121 protocadherin 11 Y-linked isoform c PCDH11Y 0.121 protocadherin 11 Y-linked isoform b PCDH11Y 0.121 protocadherin 11 Y-linked isoform a PCDH11X 0.120 protocadherin 11 X-linked isoform a precursor PCDH11X 0.120 protocadherin 11 X-linked isoform d PCDH11X 0.120 protocadherin 11 X-linked isoform c PCDH11X 0.120 protocadherin 11 X-linked isoform b precursor PCDH15 0.118 protocadherin 15 isoform CD1-4 precursor PCDH15 0.118 protocadherin 15 isoform CD1-10 precursor PCDH15 0.118 protocadherin 15 isoform CD3-2 precursor PCDH15 0.118 protocadherin 15 isoform CD3-1 precursor PCDH15 0.118 protocadherin 15 isoform CD2-2 precursor PCDH15 0.118 protocadherin 15 isoform CD1-9 precursor PCDH15 0.118 protocadherin 15 isoform CD1-8 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.