PCDH15 13781

Name: PCDH15	Sequence: fasta or formatted (1935aa)		NCBI GI: 218505785
Description: protocadherin 15 isoform CD1-9 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions
Other entries for this name: alt prot [1955aa] protocadherin 15 isoform CD1-4 precursor alt prot [1962aa] protocadherin 15 isoform CD1-1 precursor alt prot [1957aa] protocadherin 15 isoform CD1-2 precursor alt prot [1886aa] protocadherin 15 isoform CD1-6 precursor alt prot [1952aa] protocadherin 15 isoform CD1-7 precursor alt prot [1915aa] protocadherin 15 isoform CD1-8 precursor alt prot [1790aa] protocadherin 15 isoform CD2-1 precursor alt prot [1539aa] protocadherin 15 isoform CD2-2 precursor alt prot [1682aa] protocadherin 15 isoform CD3-1 precursor alt prot [1677aa] protocadherin 15 isoform CD3-2 precursor alt prot [1932aa] protocadherin 15 isoform CD1-10 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 111 3 C cysteine 1.2 23 2 D aspartate 6.0 116 2 E glutamate 6.4 123 3 F phenylalanine 3.8 74 2 G glycine 5.1 98 2 H histidine 1.6 30 1 I isoleucine 6.9 134 3 K lysine 4.0 77 2 L leucine 8.5 164 2 M methionine 1.8 34 1 N asparagine 5.1 99 2 P proline 9.0 175 9 Q glutamine 3.7 72 2 R arginine 4.8 92 2 S serine 7.4 143 3 T threonine 7.6 148 5 V valine 7.9 152 3 W tryptophan 0.2 4 1 Y tyrosine 3.4 66 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 15 isoform CD1-9 precursor PCDH15 0.997 protocadherin 15 isoform CD1-10 precursor PCDH15 0.997 protocadherin 15 isoform CD1-2 precursor PCDH15 0.996 protocadherin 15 isoform CD1-1 precursor PCDH15 0.994 protocadherin 15 isoform CD1-4 precursor PCDH15 0.991 protocadherin 15 isoform CD1-7 precursor PCDH15 0.967 protocadherin 15 isoform CD1-8 precursor PCDH15 0.733 protocadherin 15 isoform CD3-2 precursor PCDH15 0.733 protocadherin 15 isoform CD2-2 precursor PCDH15 0.732 protocadherin 15 isoform CD3-1 precursor PCDH15 0.730 protocadherin 15 isoform CD2-1 precursor PCDH15 0.673 protocadherin 15 isoform CD1-6 precursor FAT4 0.083 FAT tumor suppressor homolog 4 FAT3 0.078 FAT tumor suppressor homolog 3 FAT1 0.075 FAT tumor suppressor 1 precursor CELSR2 0.070 cadherin EGF LAG seven-pass G-type receptor 2 DCHS1 0.069 dachsous 1 precursor CDH23 0.069 cadherin-like 23 isoform 1 precursor DCHS2 0.067 dachsous 2 isoform 1 CELSR3 0.066 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... CELSR1 0.063 cadherin EGF LAG seven-pass G-type receptor 1 FAT2 0.063 FAT tumor suppressor 2 precursor DCHS2 0.051 dachsous 2 isoform 2 PCDH9 0.047 protocadherin 9 isoform 2 precursor PCDH9 0.047 protocadherin 9 isoform 1 precursor PCDH11Y 0.045 protocadherin 11 Y-linked isoform c PCDH11Y 0.045 protocadherin 11 Y-linked isoform b PCDH11Y 0.045 protocadherin 11 Y-linked isoform a PCDH11X 0.044 protocadherin 11 X-linked isoform a precursor PCDH11X 0.044 protocadherin 11 X-linked isoform d Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.