PCDH21 9324

Name: PCDH21	Sequence: fasta or formatted (859aa)		NCBI GI: 16933565
Description: protocadherin 21 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 71 2 C cysteine 0.5 4 1 D aspartate 5.7 49 1 E glutamate 5.8 50 2 F phenylalanine 3.8 33 2 G glycine 6.2 53 3 H histidine 2.0 17 1 I isoleucine 5.2 45 2 K lysine 4.8 41 2 L leucine 8.0 69 2 M methionine 1.6 14 1 N asparagine 5.1 44 3 P proline 7.7 66 4 Q glutamine 3.1 27 1 R arginine 4.2 36 2 S serine 7.6 65 2 T threonine 7.6 65 3 V valine 9.2 79 2 W tryptophan 0.9 8 1 Y tyrosine 2.7 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 21 precursor CDH23 0.152 cadherin-like 23 isoform 1 precursor PCDH24 0.142 protocadherin LKC precursor FAT3 0.119 FAT tumor suppressor homolog 3 DCHS2 0.117 dachsous 2 isoform 1 FAT1 0.115 FAT tumor suppressor 1 precursor FAT4 0.114 FAT tumor suppressor homolog 4 CDH23 0.111 cadherin-like 23 isoform 2 precursor CELSR2 0.107 cadherin EGF LAG seven-pass G-type receptor 2 CELSR3 0.107 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... PCDH1 0.101 protocadherin 1 isoform 2 precursor PCDH1 0.101 protocadherin 1 isoform 1 precursor CELSR1 0.100 cadherin EGF LAG seven-pass G-type receptor 1 DCHS1 0.098 dachsous 1 precursor FAT2 0.095 FAT tumor suppressor 2 precursor PCDHGA2 0.095 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.095 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDH11X 0.091 protocadherin 11 X-linked isoform a precursor PCDH11X 0.091 protocadherin 11 X-linked isoform d PCDH11X 0.091 protocadherin 11 X-linked isoform c PCDH11X 0.091 protocadherin 11 X-linked isoform b precursor PCDH11Y 0.090 protocadherin 11 Y-linked isoform c PCDH11Y 0.090 protocadherin 11 Y-linked isoform b PCDH11Y 0.090 protocadherin 11 Y-linked isoform a PCDH9 0.089 protocadherin 9 isoform 2 precursor PCDH9 0.089 protocadherin 9 isoform 1 precursor PCDHGA10 0.087 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.087 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA6 0.083 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.083 protocadherin gamma subfamily A, 6 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.