PCDH11X 4177

Name: PCDH11X	Sequence: fasta or formatted (1337aa)		NCBI GI: 14589922
Description: protocadherin 11 X-linked isoform d		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1025aa] protocadherin 11 X-linked isoform b precursor alt prot [1347aa] protocadherin 11 X-linked isoform c alt prot [1021aa] protocadherin 11 X-linked isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 88 3 C cysteine 1.5 20 1 D aspartate 6.8 91 2 E glutamate 5.8 78 2 F phenylalanine 3.4 45 1 G glycine 4.4 59 2 H histidine 2.8 37 2 I isoleucine 6.3 84 2 K lysine 4.7 63 8 L leucine 8.0 107 3 M methionine 1.6 22 2 N asparagine 5.5 74 2 P proline 7.5 100 3 Q glutamine 4.2 56 2 R arginine 3.4 45 2 S serine 8.7 116 5 T threonine 7.6 102 2 V valine 8.6 115 4 W tryptophan 0.4 5 1 Y tyrosine 2.2 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 11 X-linked isoform d PCDH11X 0.997 protocadherin 11 X-linked isoform c PCDH11Y 0.947 protocadherin 11 Y-linked isoform c PCDH11X 0.748 protocadherin 11 X-linked isoform a precursor PCDH11X 0.748 protocadherin 11 X-linked isoform b precursor PCDH11Y 0.731 protocadherin 11 Y-linked isoform b PCDH11Y 0.731 protocadherin 11 Y-linked isoform a PCDH9 0.479 protocadherin 9 isoform 1 precursor PCDH9 0.478 protocadherin 9 isoform 2 precursor PCDH1 0.253 protocadherin 1 isoform 2 precursor PCDH1 0.241 protocadherin 1 isoform 1 precursor PCDH20 0.228 protocadherin 20 PCDH7 0.219 protocadherin 7 isoform b precursor PCDH7 0.219 protocadherin 7 isoform a precursor PCDH7 0.219 protocadherin 7 isoform c precursor PCDHGA10 0.128 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.128 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH18 0.126 protocadherin 18 precursor PCDHGA12 0.125 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.125 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDH17 0.125 protocadherin 17 precursor PCDH19 0.124 protocadherin 19 isoform a PCDH19 0.124 protocadherin 19 isoform b PCDHGA7 0.123 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.123 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB1 0.122 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.122 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDH10 0.122 protocadherin 10 isoform 1 precursor PCDH10 0.122 protocadherin 10 isoform 2 precursor PCDHGA11 0.121 protocadherin gamma subfamily A, 11 isoform 2 precur... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.