PCDH9 29714

Name: PCDH9	Sequence: fasta or formatted (1237aa)		NCBI GI: 45243534
Description: protocadherin 9 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1203aa] protocadherin 9 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 74 2 C cysteine 1.1 13 1 D aspartate 6.9 85 2 E glutamate 6.0 74 2 F phenylalanine 4.0 49 2 G glycine 5.7 70 2 H histidine 2.4 30 2 I isoleucine 6.1 75 2 K lysine 5.7 71 4 L leucine 7.6 94 2 M methionine 1.0 12 1 N asparagine 6.5 81 2 P proline 6.8 84 2 Q glutamine 4.0 49 2 R arginine 3.9 48 2 S serine 8.8 109 3 T threonine 7.0 86 2 V valine 7.8 97 2 W tryptophan 0.5 6 1 Y tyrosine 2.4 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 9 isoform 1 precursor PCDH9 0.963 protocadherin 9 isoform 2 precursor PCDH11X 0.517 protocadherin 11 X-linked isoform d PCDH11X 0.516 protocadherin 11 X-linked isoform c PCDH11Y 0.512 protocadherin 11 Y-linked isoform c PCDH11X 0.472 protocadherin 11 X-linked isoform b precursor PCDH11X 0.471 protocadherin 11 X-linked isoform a precursor PCDH11Y 0.469 protocadherin 11 Y-linked isoform b PCDH11Y 0.469 protocadherin 11 Y-linked isoform a PCDH1 0.290 protocadherin 1 isoform 2 precursor PCDH1 0.274 protocadherin 1 isoform 1 precursor PCDH7 0.274 protocadherin 7 isoform a precursor PCDH7 0.274 protocadherin 7 isoform c precursor PCDH7 0.273 protocadherin 7 isoform b precursor PCDH20 0.257 protocadherin 20 PCDH18 0.146 protocadherin 18 precursor PCDHGA10 0.141 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.141 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDH17 0.141 protocadherin 17 precursor PCDH19 0.141 protocadherin 19 isoform a PCDH19 0.141 protocadherin 19 isoform b PCDHGA7 0.139 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.139 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDH10 0.137 protocadherin 10 isoform 1 precursor PCDH10 0.137 protocadherin 10 isoform 2 precursor PCDHGA12 0.137 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.137 protocadherin gamma subfamily A, 12 isoform 2 precur... FAT4 0.134 FAT tumor suppressor homolog 4 PCDHGA3 0.134 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.134 protocadherin gamma subfamily A, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.