LOC100128943 9083

Name: LOC100128943	Sequence: fasta or formatted (191aa)		NCBI GI: 169215666
Description: PREDICTED: similar to hCG2038853		Not currently referenced in the text
Other entries for this name: alt mRNA {191aa} PREDICTED: similar to hCG2038853 alt mRNA {191aa} PREDICTED: similar to hCG2038853
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 22 2 C cysteine 2.6 5 1 D aspartate 1.6 3 1 E glutamate 6.8 13 1 F phenylalanine 1.6 3 1 G glycine 20.4 39 2 H histidine 2.1 4 1 I isoleucine 0.5 1 1 K lysine 4.7 9 1 L leucine 5.2 10 2 M methionine 1.0 2 1 N asparagine 1.6 3 1 P proline 8.4 16 1 Q glutamine 3.7 7 2 R arginine 9.9 19 1 S serine 5.2 10 1 T threonine 5.8 11 1 V valine 5.2 10 2 W tryptophan 2.1 4 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2038853 LOC100128943 1.000 PREDICTED: similar to hCG2038853 LOC100128943 1.000 PREDICTED: similar to hCG2038853 COL5A2 0.058 alpha 2 type V collagen preproprotein COL1A1 0.055 alpha 1 type I collagen preproprotein COL2A1 0.055 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.055 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.053 alpha 1 type V collagen preproprotein COL1A2 0.047 alpha 2 type I collagen COL3A1 0.045 collagen type III alpha 1 preproprotein COL11A2 0.045 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.045 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.045 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL6A3 0.045 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.045 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.045 alpha 3 type VI collagen isoform 4 precursor LOC284988 0.045 PREDICTED: hypothetical protein LOC100131851 0.042 PREDICTED: hypothetical protein LOC100130751 0.042 PREDICTED: hypothetical protein COL11A1 0.042 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.042 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.042 alpha 1 type XI collagen isoform A preproprotein [Ho... MARCO 0.042 macrophage receptor with collagenous structure COL4A4 0.040 alpha 4 type IV collagen precursor SFTPD 0.040 pulmonary surfactant-associated protein D precursor ... LOC100290946 0.040 PREDICTED: hypothetical protein XP_002347121 LOC100288840 0.040 PREDICTED: hypothetical protein XP_002344246 COL27A1 0.040 collagen, type XXVII, alpha 1 COL6A1 0.040 collagen, type VI, alpha 1 precursor DACT3 0.040 thymus expressed gene 3-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.