Guide to the Human Genome
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Name: LOC100134395 Sequence: fasta or formatted (261aa) NCBI GI: 169206246
Description:

PREDICTED: hypothetical protein, partial

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         10           1
 C cysteine            9.2         24           1
 D aspartate           0.4          1           1
 E glutamate           2.3          6           2
 F phenylalanine       2.3          6           1
 G glycine             1.5          4           2
 H histidine           8.4         22           1
 I isoleucine         12.6         33           1
 K lysine              2.3          6           2
 L leucine             3.8         10           2
 M methionine          6.9         18           1
 N asparagine          0.4          1           1
 P proline             0.4          1           1
 Q glutamine           1.5          4           1
 R arginine            3.1          8           2
 S serine              3.8         10           2
 T threonine           6.9         18           1
 V valine             10.7         28           1
 W tryptophan          0.8          2           1
 Y tyrosine           18.8         49           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein, partial 
LOC100294466          0.677   PREDICTED: hypothetical protein, partial 
LOC100129642          0.361   PREDICTED: hypothetical protein 
LOC100133226          0.350   PREDICTED: hypothetical protein 
LOC100132016          0.348   PREDICTED: hypothetical protein 
LOC100291751          0.338   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100132423          0.338   PREDICTED: hypothetical protein, partial 
LOC100134730          0.334   PREDICTED: hypothetical protein 
LOC100134060          0.332   PREDICTED: hypothetical protein 
LOC100128267          0.330   PREDICTED: hypothetical protein, partial 
LOC100134279          0.329   PREDICTED: hypothetical protein, partial 
LOC100134411          0.325   PREDICTED: hypothetical protein 
LOC100132983          0.320   PREDICTED: hypothetical protein 
LOC100133975          0.316   PREDICTED: hypothetical protein, partial 
LOC100134139          0.314   PREDICTED: hypothetical protein 
LOC100132679          0.314   PREDICTED: hypothetical protein 
LOC100288317          0.314   PREDICTED: hypothetical protein XP_002342505 
LOC100134353          0.312   PREDICTED: hypothetical protein 
LOC100131203          0.309   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.309   PREDICTED: similar to serine/threonine-protein kina...
LOC100133741          0.309   PREDICTED: hypothetical protein 
LOC100133450          0.307   PREDICTED: hypothetical protein, partial 
LOC100287975          0.307   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100132016          0.307   PREDICTED: hypothetical protein 
LOC100133553          0.307   PREDICTED: hypothetical protein, partial 
LOC100293574          0.303   PREDICTED: hypothetical protein, partial 
LOC100134332          0.300   PREDICTED: hypothetical protein, partial 
LOC100129825          0.298   PREDICTED: hypothetical protein 
LOC100132782          0.298   PREDICTED: hypothetical protein 
LOC100131203          0.298   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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