Guide to the Human Genome
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Name: LOC100132016 Sequence: fasta or formatted (264aa) NCBI GI: 239746918
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {250aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         10           2
 C cysteine           11.7         31           1
 D aspartate           0.4          1           1
 E glutamate           1.9          5           2
 F phenylalanine       1.5          4           1
 G glycine             1.5          4           1
 H histidine           6.8         18           1
 I isoleucine         11.4         30           2
 K lysine              0.8          2           1
 L leucine             2.7          7           1
 M methionine          6.8         18           1
 N asparagine          0.0          0           0
 P proline             3.8         10           3
 Q glutamine           1.9          5           1
 R arginine            3.4          9           5
 S serine              1.1          3           2
 T threonine           6.8         18           1
 V valine             14.8         39           1
 W tryptophan          0.0          0           0
 Y tyrosine           18.9         50           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132016          0.551   PREDICTED: hypothetical protein 
LOC100133226          0.420   PREDICTED: hypothetical protein 
LOC100134411          0.402   PREDICTED: hypothetical protein 
LOC100134279          0.392   PREDICTED: hypothetical protein, partial 
LOC100288317          0.379   PREDICTED: hypothetical protein XP_002342505 
LOC100291751          0.376   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100131203          0.353   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.353   PREDICTED: similar to serine/threonine-protein kina...
LOC100132679          0.353   PREDICTED: hypothetical protein 
LOC100132983          0.350   PREDICTED: hypothetical protein 
LOC100133741          0.343   PREDICTED: hypothetical protein 
LOC100134395          0.339   PREDICTED: hypothetical protein, partial 
LOC100131203          0.337   PREDICTED: hypothetical protein 
LOC100134060          0.336   PREDICTED: hypothetical protein 
LOC100294466          0.334   PREDICTED: hypothetical protein, partial 
LOC100133975          0.329   PREDICTED: hypothetical protein, partial 
LOC100129825          0.329   PREDICTED: hypothetical protein 
LOC100133515          0.327   PREDICTED: hypothetical protein 
LOC100129642          0.327   PREDICTED: hypothetical protein 
LOC100133450          0.325   PREDICTED: hypothetical protein, partial 
LOC100129802          0.325   PREDICTED: hypothetical protein 
LOC100287975          0.325   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100293574          0.325   PREDICTED: hypothetical protein, partial 
LOC100134730          0.323   PREDICTED: hypothetical protein 
LOC100134353          0.323   PREDICTED: hypothetical protein 
LOC100134139          0.323   PREDICTED: hypothetical protein 
LOC100134332          0.320   PREDICTED: hypothetical protein, partial 
LOC100128267          0.318   PREDICTED: hypothetical protein, partial 
LOC100134325          0.313   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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