Guide to the Human Genome
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Name: LOC100132016 Sequence: fasta or formatted (250aa) NCBI GI: 239752401
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {264aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         10           2
 C cysteine           11.2         28           1
 D aspartate           0.4          1           1
 E glutamate           2.0          5           2
 F phenylalanine       1.2          3           1
 G glycine             1.6          4           1
 H histidine           5.6         14           1
 I isoleucine         11.2         28           2
 K lysine              0.8          2           1
 L leucine             2.8          7           1
 M methionine          9.2         23           1
 N asparagine          0.0          0           0
 P proline             4.0         10           3
 Q glutamine           2.0          5           1
 R arginine            4.4         11           5
 S serine              1.2          3           2
 T threonine           5.6         14           1
 V valine             13.2         33           1
 W tryptophan          0.0          0           0
 Y tyrosine           19.6         49           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132016          0.598   PREDICTED: hypothetical protein 
LOC100134353          0.391   PREDICTED: hypothetical protein 
LOC100134411          0.378   PREDICTED: hypothetical protein 
LOC100133226          0.367   PREDICTED: hypothetical protein 
LOC100134279          0.367   PREDICTED: hypothetical protein, partial 
LOC100131203          0.356   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.356   PREDICTED: similar to serine/threonine-protein kina...
LOC100129825          0.354   PREDICTED: hypothetical protein 
LOC100133450          0.350   PREDICTED: hypothetical protein, partial 
LOC100287975          0.350   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100134060          0.350   PREDICTED: hypothetical protein 
LOC100132679          0.346   PREDICTED: hypothetical protein 
LOC100129642          0.346   PREDICTED: hypothetical protein 
LOC100133741          0.343   PREDICTED: hypothetical protein 
LOC100131203          0.339   PREDICTED: hypothetical protein 
LOC100132983          0.339   PREDICTED: hypothetical protein 
LOC100133844          0.333   PREDICTED: hypothetical protein 
LOC100133515          0.333   PREDICTED: hypothetical protein 
LOC100293574          0.328   PREDICTED: hypothetical protein, partial 
LOC100134139          0.328   PREDICTED: hypothetical protein 
LOC100288317          0.324   PREDICTED: hypothetical protein XP_002342505 
LOC100134730          0.324   PREDICTED: hypothetical protein 
LOC100133975          0.320   PREDICTED: hypothetical protein, partial 
LOC100134395          0.311   PREDICTED: hypothetical protein, partial 
LOC100132423          0.311   PREDICTED: hypothetical protein, partial 
LOC100133776          0.307   PREDICTED: similar to hCG1820441 
LOC100291751          0.307   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100294466          0.305   PREDICTED: hypothetical protein, partial 
LOC100289649          0.305   PREDICTED: hypothetical protein XP_002342367 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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