Guide to the Human Genome
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Name: LOC100128267 Sequence: fasta or formatted (300aa) NCBI GI: 169163053
Description:

PREDICTED: hypothetical protein, partial

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         12           2
 C cysteine            7.3         22           1
 D aspartate           1.0          3           1
 E glutamate           1.7          5           2
 F phenylalanine       1.3          4           1
 G glycine             4.0         12           1
 H histidine          10.7         32           2
 I isoleucine         18.0         54           1
 K lysine              0.7          2           1
 L leucine             2.7          8           1
 M methionine          3.7         11           1
 N asparagine          0.3          1           1
 P proline             6.3         19           2
 Q glutamine           2.7          8           2
 R arginine            4.7         14           2
 S serine              3.7         11           2
 T threonine           4.3         13           1
 V valine              9.7         29           2
 W tryptophan          1.0          3           1
 Y tyrosine           12.3         37           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein, partial 
LOC100294466          0.288   PREDICTED: hypothetical protein, partial 
LOC100134395          0.287   PREDICTED: hypothetical protein, partial 
LOC100132016          0.283   PREDICTED: hypothetical protein 
LOC100134411          0.282   PREDICTED: hypothetical protein 
LOC100134332          0.274   PREDICTED: hypothetical protein, partial 
LOC100134279          0.268   PREDICTED: hypothetical protein, partial 
LOC100133515          0.268   PREDICTED: hypothetical protein 
LOC100133226          0.266   PREDICTED: hypothetical protein 
LOC100291751          0.265   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100293574          0.263   PREDICTED: hypothetical protein, partial 
LOC100129802          0.263   PREDICTED: hypothetical protein, partial 
LOC100132983          0.262   PREDICTED: hypothetical protein 
LOC100129825          0.260   PREDICTED: hypothetical protein 
LOC100134730          0.260   PREDICTED: hypothetical protein 
LOC100129642          0.257   PREDICTED: hypothetical protein 
LOC100288317          0.257   PREDICTED: hypothetical protein XP_002342505 
LOC100132423          0.255   PREDICTED: hypothetical protein, partial 
LOC100289649          0.255   PREDICTED: hypothetical protein XP_002342367 
LOC100131203          0.252   PREDICTED: hypothetical protein 
LOC100131203          0.251   PREDICTED: similar to serine/threonine-protein kina...
LOC100133741          0.251   PREDICTED: hypothetical protein 
LOC100131203          0.251   PREDICTED: similar to serine/threonine-protein kina...
LOC100134353          0.249   PREDICTED: hypothetical protein 
LOC100134060          0.249   PREDICTED: hypothetical protein 
LOC100133553          0.249   PREDICTED: hypothetical protein, partial 
LOC100134139          0.248   PREDICTED: hypothetical protein 
LOC100129802          0.246   PREDICTED: hypothetical protein 
LOC100133173          0.246   PREDICTED: hypothetical protein 
LOC100133450          0.245   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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