Guide to the Human Genome
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Name: LOC100131203 Sequence: fasta or formatted (232aa) NCBI GI: 239754336
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {230aa} PREDICTED: similar to serine/threonine-protein kinase, putative
alt prot {230aa} PREDICTED: similar to serine/threonine-protein kinase, putative
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.9          2           1
 C cysteine            8.2         19           1
 D aspartate           0.9          2           1
 E glutamate           0.0          0           0
 F phenylalanine       0.9          2           1
 G glycine             0.0          0           0
 H histidine          12.5         29           1
 I isoleucine         20.3         47           1
 K lysine              0.0          0           0
 L leucine             3.0          7           1
 M methionine          4.3         10           1
 N asparagine          0.0          0           0
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            0.9          2           1
 S serine              0.0          0           0
 T threonine           9.9         23           1
 V valine             11.2         26           1
 W tryptophan          0.9          2           1
 X unknown             0.4          1           1
 Y tyrosine           25.9         60           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131203          0.651   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.651   PREDICTED: similar to serine/threonine-protein kina...
LOC100134060          0.495   PREDICTED: hypothetical protein 
LOC100133226          0.450   PREDICTED: hypothetical protein 
LOC100288317          0.446   PREDICTED: hypothetical protein XP_002342505 
LOC100134411          0.422   PREDICTED: hypothetical protein 
LOC100129642          0.418   PREDICTED: hypothetical protein 
LOC100133844          0.414   PREDICTED: hypothetical protein 
LOC100132679          0.410   PREDICTED: hypothetical protein 
LOC100132107          0.400   PREDICTED: hypothetical protein 
LOC100133173          0.400   PREDICTED: hypothetical protein 
LOC100291751          0.393   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100132983          0.389   PREDICTED: hypothetical protein 
LOC100134332          0.387   PREDICTED: hypothetical protein, partial 
LOC100134279          0.381   PREDICTED: hypothetical protein, partial 
LOC100133515          0.381   PREDICTED: hypothetical protein 
LOC100132016          0.379   PREDICTED: hypothetical protein 
LOC100133741          0.371   PREDICTED: hypothetical protein 
LOC100134139          0.367   PREDICTED: hypothetical protein 
LOC100132423          0.361   PREDICTED: hypothetical protein, partial 
LOC100133450          0.361   PREDICTED: hypothetical protein, partial 
LOC100287975          0.361   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100132016          0.359   PREDICTED: hypothetical protein 
LOC100134325          0.355   PREDICTED: hypothetical protein 
LOC100129802          0.351   PREDICTED: hypothetical protein 
LOC100134730          0.351   PREDICTED: hypothetical protein 
LOC100289649          0.349   PREDICTED: hypothetical protein XP_002342367 
LOC100133776          0.349   PREDICTED: similar to hCG1820441 
LOC100293574          0.347   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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