Guide to the Human Genome
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Name: LOC100134730 Sequence: fasta or formatted (233aa) NCBI GI: 239508735
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           10.3         24           1
 D aspartate           0.4          1           1
 E glutamate           1.3          3           1
 F phenylalanine       0.4          1           1
 G glycine             2.1          5           1
 H histidine           7.3         17           1
 I isoleucine         17.2         40           1
 K lysine              1.3          3           1
 L leucine             0.9          2           1
 M methionine          5.6         13           1
 N asparagine          0.0          0           0
 P proline             0.4          1           1
 Q glutamine           0.0          0           0
 R arginine            0.0          0           0
 S serine              2.1          5           2
 T threonine           8.6         20           1
 V valine             14.6         34           1
 W tryptophan          0.0          0           0
 Y tyrosine           27.5         64           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100133226          0.449   PREDICTED: hypothetical protein 
LOC100134060          0.425   PREDICTED: hypothetical protein 
LOC100129642          0.411   PREDICTED: hypothetical protein 
LOC100134411          0.399   PREDICTED: hypothetical protein 
LOC100133450          0.383   PREDICTED: hypothetical protein, partial 
LOC100287975          0.383   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100132679          0.381   PREDICTED: hypothetical protein 
LOC100131203          0.379   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.379   PREDICTED: similar to serine/threonine-protein kina...
LOC100129825          0.377   PREDICTED: hypothetical protein 
LOC100288317          0.372   PREDICTED: hypothetical protein XP_002342505 
LOC100133515          0.370   PREDICTED: hypothetical protein 
LOC100134395          0.368   PREDICTED: hypothetical protein, partial 
LOC100293574          0.368   PREDICTED: hypothetical protein, partial 
LOC100132016          0.366   PREDICTED: hypothetical protein 
LOC100132983          0.364   PREDICTED: hypothetical protein 
LOC100134332          0.362   PREDICTED: hypothetical protein, partial 
LOC100129802          0.358   PREDICTED: hypothetical protein 
LOC100133844          0.358   PREDICTED: hypothetical protein 
LOC100291751          0.358   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100134353          0.356   PREDICTED: hypothetical protein 
LOC100132782          0.352   PREDICTED: hypothetical protein 
LOC100134279          0.352   PREDICTED: hypothetical protein, partial 
LOC100131203          0.352   PREDICTED: hypothetical protein 
LOC100133807          0.350   PREDICTED: similar to serine/threonine-protein kina...
LOC100129802          0.348   PREDICTED: hypothetical protein, partial 
LOC100132016          0.344   PREDICTED: hypothetical protein 
LOC100132423          0.342   PREDICTED: hypothetical protein, partial 
LOC100293155          0.342   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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