Guide to the Human Genome
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Name: LOC100131203 Sequence: fasta or formatted (230aa) NCBI GI: 239742911
Description:

PREDICTED: similar to serine/threonine-protein kinase, putative

Not currently referenced in the text

Other entries for this name:
alt mRNA {230aa} PREDICTED: similar to serine/threonine-protein kinase, putative
alt prot {232aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.9          2           1
 C cysteine            9.6         22           1
 D aspartate           0.0          0           0
 E glutamate           1.7          4           4
 F phenylalanine       0.0          0           0
 G glycine             0.4          1           1
 H histidine           9.6         22           1
 I isoleucine         16.5         38           1
 K lysine              0.4          1           1
 L leucine             0.9          2           1
 M methionine          6.5         15           1
 N asparagine          0.0          0           0
 P proline             0.0          0           0
 Q glutamine           0.4          1           1
 R arginine            0.4          1           1
 S serine              0.0          0           0
 T threonine          12.2         28           1
 V valine             11.3         26           1
 W tryptophan          0.0          0           0
 Y tyrosine           29.1         67           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to serine/threonine-protein kina... 
LOC100131203          1.000   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.590   PREDICTED: hypothetical protein 
LOC100134060          0.479   PREDICTED: hypothetical protein 
LOC100133226          0.462   PREDICTED: hypothetical protein 
LOC100129642          0.444   PREDICTED: hypothetical protein 
LOC100288317          0.432   PREDICTED: hypothetical protein XP_002342505 
LOC100134411          0.420   PREDICTED: hypothetical protein 
LOC100132679          0.408   PREDICTED: hypothetical protein 
LOC100291751          0.406   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100133515          0.396   PREDICTED: hypothetical protein 
LOC100132016          0.391   PREDICTED: hypothetical protein 
LOC100132983          0.389   PREDICTED: hypothetical protein 
LOC100133173          0.389   PREDICTED: hypothetical protein 
LOC100133741          0.377   PREDICTED: hypothetical protein 
LOC100133844          0.375   PREDICTED: hypothetical protein 
LOC100134730          0.373   PREDICTED: hypothetical protein 
LOC100132107          0.369   PREDICTED: hypothetical protein 
LOC100132423          0.369   PREDICTED: hypothetical protein, partial 
LOC100134279          0.363   PREDICTED: hypothetical protein, partial 
LOC100134332          0.363   PREDICTED: hypothetical protein, partial 
LOC100132016          0.361   PREDICTED: hypothetical protein 
LOC100133450          0.359   PREDICTED: hypothetical protein, partial 
LOC100287975          0.359   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100133776          0.357   PREDICTED: similar to hCG1820441 
LOC100134139          0.357   PREDICTED: hypothetical protein 
LOC100293574          0.355   PREDICTED: hypothetical protein, partial 
LOC100134325          0.351   PREDICTED: hypothetical protein 
LOC100289649          0.349   PREDICTED: hypothetical protein XP_002342367 
LOC100134353          0.337   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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