Guide to the Human Genome
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Name: LOC100133226 Sequence: fasta or formatted (219aa) NCBI GI: 169210737
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine           16.0         35           1
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine             0.0          0           0
 H histidine           4.1          9           1
 I isoleucine         21.0         46           1
 K lysine              0.5          1           1
 L leucine             0.0          0           0
 M methionine          7.8         17           1
 N asparagine          0.5          1           1
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            0.0          0           0
 S serine              0.0          0           0
 T threonine           5.0         11           1
 V valine             15.5         34           1
 W tryptophan          0.0          0           0
 Y tyrosine           29.7         65           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100134411          0.575   PREDICTED: hypothetical protein 
LOC100129825          0.507   PREDICTED: hypothetical protein 
LOC100132016          0.495   PREDICTED: hypothetical protein 
LOC100131203          0.491   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.491   PREDICTED: similar to serine/threonine-protein kina...
LOC100129642          0.474   PREDICTED: hypothetical protein 
LOC100293574          0.472   PREDICTED: hypothetical protein, partial 
LOC100291751          0.472   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100131203          0.470   PREDICTED: hypothetical protein 
LOC100133450          0.462   PREDICTED: hypothetical protein, partial 
LOC100287975          0.462   PREDICTED: hypothetical protein XP_002342501, parti...
LOC100132679          0.460   PREDICTED: hypothetical protein 
LOC100134730          0.458   PREDICTED: hypothetical protein 
LOC100133844          0.456   PREDICTED: hypothetical protein 
LOC100288317          0.454   PREDICTED: hypothetical protein XP_002342505 
LOC100134353          0.447   PREDICTED: hypothetical protein 
LOC100134060          0.447   PREDICTED: hypothetical protein 
LOC100134279          0.441   PREDICTED: hypothetical protein, partial 
LOC100132983          0.433   PREDICTED: hypothetical protein 
LOC100129802          0.425   PREDICTED: hypothetical protein 
LOC100133741          0.421   PREDICTED: hypothetical protein 
LOC100133173          0.421   PREDICTED: hypothetical protein 
LOC100133515          0.419   PREDICTED: hypothetical protein 
LOC100133975          0.408   PREDICTED: hypothetical protein, partial 
LOC100134395          0.408   PREDICTED: hypothetical protein, partial 
LOC100132016          0.406   PREDICTED: hypothetical protein 
LOC100132423          0.404   PREDICTED: hypothetical protein, partial 
LOC100133807          0.402   PREDICTED: similar to serine/threonine-protein kina...
LOC100134139          0.396   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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