BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] (297 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] 630 0.0 gi|23238204 tumor necrosis factor receptor superfamily, member 1... 189 3e-48 gi|23238202 tumor necrosis factor receptor superfamily, member 1... 189 3e-48 gi|11641231 ectodysplasin A receptor precursor [Homo sapiens] 65 5e-11 gi|23238200 RELT tumor necrosis factor receptor precursor [Homo ... 56 3e-08 gi|21361873 RELT tumor necrosis factor receptor precursor [Homo ... 56 3e-08 gi|4507587 tumor necrosis factor receptor superfamily, member 7 ... 49 4e-06 gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 48 9e-06 gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 48 1e-05 gi|23200041 tumor necrosis factor receptor superfamily, member 1... 48 1e-05 gi|4505039 lymphotoxin beta receptor [Homo sapiens] 46 5e-05 gi|14790170 tumor necrosis factor receptor superfamily, member 6... 43 3e-04 gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 43 3e-04 gi|4507565 tumor necrosis factor receptor superfamily, member 11... 41 0.001 gi|148743793 osteoprotegerin precursor [Homo sapiens] 40 0.002 gi|148886654 polydom [Homo sapiens] 39 0.006 gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens] 37 0.027 gi|23200021 tumor necrosis factor receptor superfamily, member 2... 37 0.027 gi|23200023 tumor necrosis factor receptor superfamily, member 2... 36 0.047 gi|68348711 tumor necrosis factor receptor superfamily, member 8... 35 0.079 gi|7657039 tumor necrosis factor receptor superfamily, member 21... 35 0.10 gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 34 0.14 gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 34 0.14 gi|23200025 tumor necrosis factor receptor superfamily, member 2... 34 0.14 gi|4507569 tumor necrosis factor receptor superfamily, member 25... 34 0.14 gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens] 34 0.18 gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] 34 0.18 gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] 34 0.18 gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 34 0.18 gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 34 0.18 >gi|11140823 X-linked ectodysplasin receptor [Homo sapiens] Length = 297 Score = 630 bits (1624), Expect = 0.0 Identities = 297/297 (100%), Positives = 297/297 (100%) Query: 1 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS 60 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS Sbjct: 1 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS 60 Query: 61 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF 120 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF Sbjct: 61 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF 120 Query: 121 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA 180 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA Sbjct: 121 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA 180 Query: 181 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT 240 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT Sbjct: 181 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT 240 Query: 241 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP 297 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP Sbjct: 241 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP 297 >gi|23238204 tumor necrosis factor receptor superfamily, member 19 isoform 2 precursor [Homo sapiens] Length = 417 Score = 189 bits (480), Expect = 3e-48 Identities = 86/196 (43%), Positives = 116/196 (59%) Query: 2 DCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSC 61 DC++ E+ D+ G CV C +CGPG ELSK+CG+G G DA C C R+K WG +C+ C Sbjct: 33 DCRQQEFRDRSGNCVPCNQCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPC 92 Query: 62 ITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAFQ 121 + CAV+NR QK NC+ATS+A+CGDCLP FYRKT++ G QD EC+PC P E CA + Sbjct: 93 LDCAVVNRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCASK 152 Query: 122 LSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEAD 181 ++LV+ + P++ L A++ S L LA L L +YCK+ F L + Sbjct: 153 VNLVKIASTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQ 212 Query: 182 KTAKEESLFPVPPSKE 197 E S F P E Sbjct: 213 YNGSELSCFDRPQLHE 228 >gi|23238202 tumor necrosis factor receptor superfamily, member 19 isoform 1 precursor [Homo sapiens] Length = 423 Score = 189 bits (480), Expect = 3e-48 Identities = 86/196 (43%), Positives = 116/196 (59%) Query: 2 DCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSC 61 DC++ E+ D+ G CV C +CGPG ELSK+CG+G G DA C C R+K WG +C+ C Sbjct: 33 DCRQQEFRDRSGNCVPCNQCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPC 92 Query: 62 ITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAFQ 121 + CAV+NR QK NC+ATS+A+CGDCLP FYRKT++ G QD EC+PC P E CA + Sbjct: 93 LDCAVVNRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCASK 152 Query: 122 LSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEAD 181 ++LV+ + P++ L A++ S L LA L L +YCK+ F L + Sbjct: 153 VNLVKIASTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQ 212 Query: 182 KTAKEESLFPVPPSKE 197 E S F P E Sbjct: 213 YNGSELSCFDRPQLHE 228 >gi|11641231 ectodysplasin A receptor precursor [Homo sapiens] Length = 448 Score = 65.5 bits (158), Expect = 5e-11 Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 2 DCQENEYWDQW-GRCVTCQRCGPGQELSKDCGYGEGGDAY-CTACPPRRYKSSWGHHRCQ 59 +C ENEY++Q G C C CGPG+E CGYG + Y C CP ++ S G+ C+ Sbjct: 30 NCGENEYYNQTTGLCQECPPCGPGEEPYLSCGYGTKDEDYGCVPCPAEKF-SKGGYQICR 88 Query: 60 SCITCAVINRVQKVNCTATSN-AVCGDCLPRFYR-KTRIGGLQDQECIPCTKQTPTSEVQ 117 C R + N A CG CLP +Y + R + C C P ++ + Sbjct: 89 RHKDCEGFFRATVLTPGDMENDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTK-E 147 Query: 118 CAFQLSLVEADAP 130 C S A+ P Sbjct: 148 CVGATSGASANFP 160 >gi|23238200 RELT tumor necrosis factor receptor precursor [Homo sapiens] Length = 430 Score = 56.2 bits (134), Expect = 3e-08 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 17 TCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRVQKVNCT 76 T +C PG+E D G G C CPP + ++WG CQ C++ R++ Sbjct: 28 TLWQCPPGEEPDLDPGQG----TLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGM 83 Query: 77 ATSNAVCGDCLPRFYRKTRIGGLQDQECIPCT 108 AT + +CGDC P ++ G+ C PC+ Sbjct: 84 ATRDTLCGDCWPGWFGP---WGVPRVPCQPCS 112 >gi|21361873 RELT tumor necrosis factor receptor precursor [Homo sapiens] Length = 430 Score = 56.2 bits (134), Expect = 3e-08 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 17 TCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRVQKVNCT 76 T +C PG+E D G G C CPP + ++WG CQ C++ R++ Sbjct: 28 TLWQCPPGEEPDLDPGQG----TLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLEAQVGM 83 Query: 77 ATSNAVCGDCLPRFYRKTRIGGLQDQECIPCT 108 AT + +CGDC P ++ G+ C PC+ Sbjct: 84 ATRDTLCGDCWPGWFGP---WGVPRVPCQPCS 112 >gi|4507587 tumor necrosis factor receptor superfamily, member 7 precursor [Homo sapiens] Length = 260 Score = 49.3 bits (116), Expect = 4e-06 Identities = 39/107 (36%), Positives = 43/107 (40%), Gaps = 15/107 (14%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCI 62 C E YW Q C CQ C PG L KDC A C C P S HH C Sbjct: 27 CPERHYWAQGKLC--CQMCEPGTFLVKDCDQHRKA-AQCDPCIP-GVSFSPDHHTRPHCE 82 Query: 63 TCAVINRVQKV-NCTATSNAVCGDCLPRFYRKTRIG-GLQDQECIPC 107 +C N V NCT T+NA C R G +D+EC C Sbjct: 83 SCRHCNSGLLVRNCTITANAECA---------CRNGWQCRDKECTEC 120 >gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapiens] Length = 455 Score = 48.1 bits (113), Expect = 9e-06 Identities = 72/309 (23%), Positives = 107/309 (34%), Gaps = 65/309 (21%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHR-CQSC 61 C + +Y + C +C G L DC G G D C C + +S H R C SC Sbjct: 44 CPQGKYIHPQNNSICCTKCHKGTYLYNDCP-GPGQDTDCRECESGSFTASENHLRHCLSC 102 Query: 62 ITC-AVINRVQKVNCTATSNAVCGDCLPRFYR-------------KTRIGG--------- 98 C + +V+ +CT + VCG C YR + G Sbjct: 103 SKCRKEMGQVEISSCTVDRDTVCG-CRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEK 161 Query: 99 ------------LQDQECIPCTKQTPTSEVQCAFQLSLVEADAPTVPPQEATLVALVSSL 146 L++ EC+ C+ + E +L L + + T V L L Sbjct: 162 QNTVCTCHAGFFLRENECVSCSNCKKSLE---CTKLCLPQIENVKGTEDSGTTVLL--PL 216 Query: 147 LVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEADKTAKEESLFPVPPSKETSAESQVSE 206 ++ F L L L F+ + R + L K+ P KE E Sbjct: 217 VIFFGLCLLSLLFIGLMYRYQR--WKSKLYSIVCGKST---------PEKEGELEGTT-- 263 Query: 207 NIFQTQPLNPILEDDCSSTSGF-PTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSS 265 T+PL P S T GF PT + S T S S ++P +C + + Sbjct: 264 ----TKPLAP--NPSFSPTPGFTPTLGFSPVPSSTFTSSS--TYTPGDCPNFAAPRREVA 315 Query: 266 ASYTGAETL 274 Y GA+ + Sbjct: 316 PPYQGADPI 324 >gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapiens] Length = 461 Score = 47.8 bits (112), Expect = 1e-05 Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 24/131 (18%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH-HRCQSC 61 C+ EY+DQ + + C +C PGQ C + D C +C Y W C SC Sbjct: 40 CRLREYYDQTAQ-MCCSKCSPGQHAKVFCT--KTSDTVCDSCEDSTYTQLWNWVPECLSC 96 Query: 62 ITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQE----CIPCTKQTP----- 112 + ++V+ CT N +C C P +Y L QE C P K P Sbjct: 97 GSRCSSDQVETQACTREQNRIC-TCRPGWY-----CALSKQEGCRLCAPLRKCRPGFGVA 150 Query: 113 -----TSEVQC 118 TS+V C Sbjct: 151 RPGTETSDVVC 161 Score = 28.1 bits (61), Expect = 9.7 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 7/76 (9%) Query: 42 TACPPRRYKSSWGHHRCQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQD 101 + C R Y C C + KV CT TS+ VC C Y T++ Sbjct: 38 STCRLREYYDQTAQMCCSKCSP----GQHAKVFCTKTSDTVCDSCEDSTY--TQLWNWV- 90 Query: 102 QECIPCTKQTPTSEVQ 117 EC+ C + + +V+ Sbjct: 91 PECLSCGSRCSSDQVE 106 >gi|23200041 tumor necrosis factor receptor superfamily, member 14 precursor [Homo sapiens] Length = 283 Score = 47.8 bits (112), Expect = 1e-05 Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 14/118 (11%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSW-GHHRCQSC 61 C+E+EY C C +C PG + + CG G C CPP Y + G +C C Sbjct: 42 CKEDEY-PVGSEC--CPKCSPGYRVKEACGELTG--TVCEPCPPGTYIAHLNGLSKCLQC 96 Query: 62 ITC--AVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQ 117 C A+ R + NC+ T NAVCG C P + + G C C +S Q Sbjct: 97 QMCDPAMGLRASR-NCSRTENAVCG-CSPGHFCIVQDG----DHCAACRAYATSSPGQ 148 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 2/56 (3%) Query: 10 DQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCA 65 D C PGQ + K G E D C CPP + + CQ C+ Sbjct: 133 DHCAACRAYATSSPGQRVQK--GGTESQDTLCQNCPPGTFSPNGTLEECQHQTKCS 186 >gi|4505039 lymphotoxin beta receptor [Homo sapiens] Length = 435 Score = 45.8 bits (107), Expect = 5e-05 Identities = 78/339 (23%), Positives = 120/339 (35%), Gaps = 68/339 (20%) Query: 4 QENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHR-CQSCI 62 QE EY++ R + C RC PG +S C D C C Y W + CQ C Sbjct: 46 QEKEYYEPQHR-ICCSRCPPGTYVSAKC--SRIRDTVCATCAENSYNEHWNYLTICQLCR 102 Query: 63 TCAVINRVQKV-NCTATSNAVC---------------------GDCLPRFYRKTRIG-GL 99 C + ++++ CT+ C DC P + + G Sbjct: 103 PCDPVMGLEEIAPCTSKRKTQCRCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEVGK 162 Query: 100 QDQECIPC------TKQTPTSEVQ----CAFQLSLVEAD--------------APTVPPQ 135 + C+PC +P++ Q C Q LVEA P P Sbjct: 163 GNNHCVPCKAGHFQNTSSPSARCQPHTRCENQ-GLVEAAPGTAQSDTTCKNPLEPLPPEM 221 Query: 136 EATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEADKTAKEESLFPVPPS 195 T++ L L + F L +F K + + G LL+ + + E PV S Sbjct: 222 SGTMLMLAVLLPLAFFLLLATVFSCIWKSHPSLCRKLGSLLK----RRPQGEGPNPVAGS 277 Query: 196 KETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECT 255 E ++ QPL PI D ++G P A+ E+ SP++ T Sbjct: 278 WEPPKAHPYFPDL--VQPLLPISGDVSPVSTGLP-------AAPVLEAGVPQQQSPLDLT 328 Query: 256 ---ELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVP 291 +L+ + S A T + G ++ TG+ N P Sbjct: 329 REPQLEPGEQSQVAHGTNGIHVTGGSMTITGNIYIYNGP 367 >gi|14790170 tumor necrosis factor receptor superfamily, member 6b [Homo sapiens] Length = 300 Score = 43.1 bits (100), Expect = 3e-04 Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 9/111 (8%) Query: 13 GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH-HRCQSCITCAVINRVQ 71 G + C +C PG + + C C CPPR Y W + RC+ C + Sbjct: 44 GERLVCAQCPPGTFVQRPCR--RDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEE 101 Query: 72 KVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIP----CTKQTPTSEVQC 118 C AT N C C F+ L+ C P TP+ QC Sbjct: 102 ARACHATHNRAC-RCRTGFFAHAGF-CLEHASCPPGAGVIAPGTPSQNTQC 150 >gi|4507585 tumor necrosis factor receptor superfamily, member 6b [Homo sapiens] Length = 300 Score = 43.1 bits (100), Expect = 3e-04 Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 9/111 (8%) Query: 13 GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH-HRCQSCITCAVINRVQ 71 G + C +C PG + + C C CPPR Y W + RC+ C + Sbjct: 44 GERLVCAQCPPGTFVQRPCR--RDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEE 101 Query: 72 KVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIP----CTKQTPTSEVQC 118 C AT N C C F+ L+ C P TP+ QC Sbjct: 102 ARACHATHNRAC-RCRTGFFAHAGF-CLEHASCPPGAGVIAPGTPSQNTQC 150 >gi|4507565 tumor necrosis factor receptor superfamily, member 11a precursor [Homo sapiens] Length = 616 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHH-RC--- 58 C ++++ GRC C +C PG+ +S C D+ C C P Y SW +C Sbjct: 34 CTSEKHYEHLGRC--CNKCEPGKYMSSKCT--TTSDSVCLPCGPDEYLDSWNEEDKCLLH 89 Query: 59 QSCITCAVINRVQKVNCTATSNAVC 83 + C T + V N T C Sbjct: 90 KVCDTGKALVAVVAGNSTTPRRCAC 114 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 8/90 (8%) Query: 3 CQENEYWDQWGRCVTCQR---CGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH-HRC 58 C +W Q C C+R C PG + D C C + ++ +C Sbjct: 114 CTAGYHWSQ--DCECCRRNTECAPGLGAQHPLQLNK--DTVCKPCLAGYFSDAFSSTDKC 169 Query: 59 QSCITCAVINRVQKVNCTATSNAVCGDCLP 88 + C + + + + T S+AVC LP Sbjct: 170 RPWTNCTFLGKRVEHHGTEKSDAVCSSSLP 199 >gi|148743793 osteoprotegerin precursor [Homo sapiens] Length = 401 Score = 40.0 bits (92), Expect = 0.002 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Query: 8 YWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCA-V 66 Y ++ + C +C PG L + C C CP Y SW H C+ C+ V Sbjct: 31 YDEETSHQLLCDKCPPGTYLKQHC--TAKWKTVCAPCPDHYYTDSW--HTSDECLYCSPV 86 Query: 67 INRVQ--KVNCTATSNAVC 83 +Q K C T N VC Sbjct: 87 CKELQYVKQECNRTHNRVC 105 >gi|148886654 polydom [Homo sapiens] Length = 3571 Score = 38.9 bits (89), Expect = 0.006 Identities = 22/74 (29%), Positives = 29/74 (39%) Query: 10 DQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINR 69 D+ G C G + + + YG+G CTACP YK SCI C N Sbjct: 289 DRMGSCKCGTHTGHFECICEKGYYGKGLQYECTACPSGTYKPEGSPGGISSCIPCPDENH 348 Query: 70 VQKVNCTATSNAVC 83 T+ + VC Sbjct: 349 TSPPGSTSPEDCVC 362 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELS-------KDCG-------YGEGGDAYCTACPPRR 48 C+ Y D+ G+ + C+ C G DC Y G C +CP Sbjct: 1018 CRIGSYQDEEGQ-LECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGLETCESCPLGT 1076 Query: 49 YKSSWGHHRCQSC 61 Y+ +G C SC Sbjct: 1077 YQPKFGSRSCLSC 1089 >gi|194097332 ephrin receptor EphB6 precursor [Homo sapiens] Length = 1021 Score = 36.6 bits (83), Expect = 0.027 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 21/98 (21%) Query: 11 QWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRV 70 +W V RC PG + ++ GD C ACP YKSS G+ C C Sbjct: 291 KWMVAVGGCRCQPGYQPAR-------GDKACQACPRGLYKSSAGNAPCSPC--------P 335 Query: 71 QKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCT 108 + + + VC CL FYR + D PCT Sbjct: 336 ARSHAPNPAAPVC-PCLEGFYRAS-----SDPPEAPCT 367 >gi|23200021 tumor necrosis factor receptor superfamily, member 25 isoform 1 precursor [Homo sapiens] Length = 426 Score = 36.6 bits (83), Expect = 0.027 Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 15/103 (14%) Query: 58 CQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPT---- 113 CQ C+ C ++R ++ C+ CG CLP FY C+ C P+ Sbjct: 138 CQPCLDCGALHRHTRLLCSRRDTD-CGTCLPGFYE-------HGDGCVSCPTPPPSLAGA 189 Query: 114 --SEVQCAFQLSLVEADAPTVPPQEATLVALVSSLLVVFTLAF 154 VQ A LS V V + L LV LL+ TL + Sbjct: 190 PWGAVQSAVPLS-VAGGRVGVFWVQVLLAGLVVPLLLGATLTY 231 >gi|23200023 tumor necrosis factor receptor superfamily, member 25 isoform 3 precursor [Homo sapiens] Length = 380 Score = 35.8 bits (81), Expect = 0.047 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 58 CQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTS--- 114 CQ C+ C ++R ++ C+ CG CLP FY C+ C T S Sbjct: 138 CQPCLDCGALHRHTRLLCSRRDTD-CGTCLPGFYE-------HGDGCVSCPTSTLGSCPE 189 Query: 115 --EVQCAFQLSLVEADAPTVPP 134 C ++ + +A T PP Sbjct: 190 RCAAVCGWRQNEAGMEALTPPP 211 >gi|68348711 tumor necrosis factor receptor superfamily, member 8 isoform 1 precursor [Homo sapiens] Length = 595 Score = 35.0 bits (79), Expect = 0.079 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 23 PGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRVQKVNCTATSNAV 82 PG ++ C G G C P Y G RC +C++C+ + V+K C S+ Sbjct: 225 PGLSPTQPCPEGSGDCR--KQCEPDYYLDEAG--RCTACVSCSRDDLVEKTPCAWNSSRT 280 Query: 83 CGDCLPRFYRKTRIGGLQDQECIP---CTKQTPTSEVQCAFQLSLVEA 127 C +C P T + C+P C +T T A + + EA Sbjct: 281 C-ECRPGMICATSATNSR-ARCVPYPICAAETVTKPQDMAEKDTTFEA 326 Score = 33.1 bits (74), Expect = 0.30 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 14 RCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSCITCAVINRVQKV 73 RC C RC G ++ C + C P Y RC +C+TC+ + V+K Sbjct: 43 RC--CYRCPMGLFPTQQCP--QRPTDCRKQCEPDYYLDE--ADRCTACVTCSRDDLVEKT 96 Query: 74 NCTATSNAVCGDCLPRFYRKT 94 C S+ VC +C P + T Sbjct: 97 PCAWNSSRVC-ECRPGMFCST 116 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSK-DCGYGEGGDAYCTACPPRRYKSSWGHHRCQSC 61 C+ + Y D+ RC C C + K C + + C P + S+ + C C Sbjct: 69 CEPDYYLDEADRCTACVTCSRDDLVEKTPCAW---NSSRVCECRPGMFCSTSAVNSCARC 125 Query: 62 ITCAV--INRVQKVNCTATSNAVCGDCLP 88 +V + K TA N VC P Sbjct: 126 FFHSVCPAGMIVKFPGTAQKNTVCEPASP 154 >gi|7657039 tumor necrosis factor receptor superfamily, member 21 precursor [Homo sapiens] Length = 655 Score = 34.7 bits (78), Expect = 0.10 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 21/117 (17%) Query: 13 GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRY-KSSWGHHRCQSCITCAVINRVQ 71 G+ +TC +C G +S+ C C++CP + + G +C C ++ Sbjct: 62 GQVLTCDKCPAGTYVSEHC--TNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIE 119 Query: 72 KVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCT----------KQTPTSEVQC 118 K+ C A ++ C C P ++ + C P T K T T +V+C Sbjct: 120 KLPCAALTDREC-TCPPGMFQ-------SNATCAPHTVCPVGWGVRKKGTETEDVRC 168 >gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6 preproprotein [Homo sapiens] Length = 863 Score = 34.3 bits (77), Expect = 0.14 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 142 LVSSLLVVFTLAFLGLFFLYCKQFFNRHCQ-RGGLLQFEADKTAKEESLFPVPPSKETSA 200 L+ SLLV+ L LG + Y + R CQ +G Q+ A ++ E P PP + A Sbjct: 698 LLLSLLVLLVLVMLGASYWYRARLHQRLCQLKGPTCQYRAAQSGPSER--PGPPQRALLA 755 Query: 201 E--SQVSENIFQTQPLNPILEDDCS 223 Q S F P P+ D S Sbjct: 756 RGTKQASALSFPAPPSRPLPPDPVS 780 >gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3 preproprotein [Homo sapiens] Length = 839 Score = 34.3 bits (77), Expect = 0.14 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 142 LVSSLLVVFTLAFLGLFFLYCKQFFNRHCQ-RGGLLQFEADKTAKEESLFPVPPSKETSA 200 L+ SLLV+ L LG + Y + R CQ +G Q+ A ++ E P PP + A Sbjct: 698 LLLSLLVLLVLVMLGASYWYRARLHQRLCQLKGPTCQYRAAQSGPSER--PGPPQRALLA 755 Query: 201 E--SQVSENIFQTQPLNPILEDDCS 223 Q S F P P+ D S Sbjct: 756 RGTKQASALSFPAPPSRPLPPDPVS 780 >gi|23200025 tumor necrosis factor receptor superfamily, member 25 isoform 4 precursor [Homo sapiens] Length = 372 Score = 34.3 bits (77), Expect = 0.14 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Query: 58 CQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQT 111 CQ C+ C ++R ++ C+ CG CLP FY C+ C T Sbjct: 93 CQPCLDCGALHRHTRLLCSRRDTD-CGTCLPGFYE-------HGDGCVSCPTST 138 >gi|4507569 tumor necrosis factor receptor superfamily, member 25 isoform 2 precursor [Homo sapiens] Length = 417 Score = 34.3 bits (77), Expect = 0.14 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Query: 58 CQSCITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQT 111 CQ C+ C ++R ++ C+ CG CLP FY C+ C T Sbjct: 138 CQPCLDCGALHRHTRLLCSRRDTD-CGTCLPGFYE-------HGDGCVSCPTST 183 >gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens] Length = 293 Score = 33.9 bits (76), Expect = 0.18 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 3 CQENEYWDQW-GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQSC 61 C E +YWD G C++C+ Q + C A+C + R+ + + H + C Sbjct: 34 CPEEQYWDPLLGTCMSCKTICNHQS-QRTCA------AFCRSLSCRKEQGKFYDHLLRDC 86 Query: 62 ITCAVI 67 I+CA I Sbjct: 87 ISCASI 92 >gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] Length = 277 Score = 33.9 bits (76), Expect = 0.18 Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 26/126 (20%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWG-------H 55 C+E +Y +C C C PGQ+L DC E + C C + +W H Sbjct: 26 CREKQYLIN-SQC--CSLCQPGQKLVSDC--TEFTETECLPCGESEFLDTWNRETHCHQH 80 Query: 56 HRCQSCI-----------TCAVINRVQKVNCTATSNAVC---GDCLPRFYRKTRIGGLQD 101 C + T + + +CT+ + C C P F K G+ D Sbjct: 81 KYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCSPGFGVKQIATGVSD 140 Query: 102 QECIPC 107 C PC Sbjct: 141 TICEPC 146 >gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] Length = 203 Score = 33.9 bits (76), Expect = 0.18 Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 26/126 (20%) Query: 3 CQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWG-------H 55 C+E +Y +C C C PGQ+L DC E + C C + +W H Sbjct: 26 CREKQYLIN-SQC--CSLCQPGQKLVSDC--TEFTETECLPCGESEFLDTWNRETHCHQH 80 Query: 56 HRCQSCI-----------TCAVINRVQKVNCTATSNAVC---GDCLPRFYRKTRIGGLQD 101 C + T + + +CT+ + C C P F K G+ D Sbjct: 81 KYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCSPGFGVKQIATGVSD 140 Query: 102 QECIPC 107 C PC Sbjct: 141 TICEPC 146 Score = 32.0 bits (71), Expect = 0.67 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 14/121 (11%) Query: 1 MDCQENEYWDQWGRCVTCQR---CGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHR 57 + C E+E+ D W R C + C P L D CT C + +S Sbjct: 60 LPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICT-CEEGWHCTS---EA 115 Query: 58 CQSCI---TCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTS 114 C+SC+ +C+ V+++ T S+ +C C F+ ++C P T+ ++ Sbjct: 116 CESCVLHRSCSPGFGVKQI-ATGVSDTICEPCPVGFFSNV---SSAFEKCHPWTRSPGSA 171 Query: 115 E 115 E Sbjct: 172 E 172 >gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo sapiens] Length = 870 Score = 33.9 bits (76), Expect = 0.18 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 13 GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH--HRCQSCITCAVINRV 70 GRC+TC+ G + + C G G+ CPP R + H +C C + +R Sbjct: 300 GRCLTCEPGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRC 359 Query: 71 QKVNCTATSNA----VCGDC 86 + T VC DC Sbjct: 360 ETKCSNGTYGEDCAFVCADC 379 >gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo sapiens] Length = 865 Score = 33.9 bits (76), Expect = 0.18 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 13 GRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGH--HRCQSCITCAVINRV 70 GRC+TC+ G + + C G G+ CPP R + H +C C + +R Sbjct: 300 GRCLTCEPGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRC 359 Query: 71 QKVNCTATSNA----VCGDC 86 + T VC DC Sbjct: 360 ETKCSNGTYGEDCAFVCADC 379 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.132 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,098,580 Number of Sequences: 37866 Number of extensions: 604597 Number of successful extensions: 2152 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 76 Number of HSP's that attempted gapping in prelim test: 2026 Number of HSP's gapped (non-prelim): 183 length of query: 297 length of database: 18,247,518 effective HSP length: 102 effective length of query: 195 effective length of database: 14,385,186 effective search space: 2805111270 effective search space used: 2805111270 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.