LOC100129492 7102

Name: LOC100129492	Sequence: fasta or formatted (119aa)		NCBI GI: 169160654
Description: PREDICTED: similar to small nuclear ribonucleoprotein D1 polypeptide 16kDa		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 4 1 C cysteine 0.0 0 0 D aspartate 3.4 4 1 E glutamate 4.2 5 1 F phenylalanine 1.7 2 1 G glycine 11.8 14 2 H histidine 2.5 3 1 I isoleucine 3.4 4 1 K lysine 8.4 10 2 L leucine 10.9 13 2 M methionine 3.4 4 1 N asparagine 4.2 5 2 P proline 4.2 5 1 Q glutamine 1.7 2 1 R arginine 14.3 17 2 S serine 4.2 5 1 T threonine 7.6 9 1 V valine 10.1 12 1 W tryptophan 0.0 0 0 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to small nuclear ribonucleoprote... SNRPD1 0.948 small nuclear ribonucleoprotein D1 polypeptide 16kDa ... SNRPD3 0.118 small nuclear ribonucleoprotein polypeptide D3 ZNF579 0.114 zinc finger protein 579 MBD2 0.104 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.104 methyl-CpG binding domain protein 2 isoform 1 LSM10 0.104 LSM10, U7 small nuclear RNA associated LARP1B 0.095 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.095 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.095 La ribonucleoprotein domain family member 2 isoform ... LSM4 0.090 U6 snRNA-associated Sm-like protein 4 LARP1 0.090 la related protein isoform 2 LARP1 0.090 la related protein isoform 1 ZC3H4 0.081 zinc finger CCCH-type containing 4 RPS2 0.071 ribosomal protein S2 PPAN 0.066 peter pan homolog RBM26 0.062 RNA binding motif protein 26 LOC390245 0.057 PREDICTED: hypothetical protein LOC390245 0.057 PREDICTED: hypothetical protein LOC390245 0.057 PREDICTED: hypothetical protein C1orf77 0.057 small protein rich in arginine and glycine ZHX1 0.052 zinc fingers and homeoboxes 1 ZHX1 0.052 zinc fingers and homeoboxes 1 LSM2 0.047 LSM2 homolog, U6 small nuclear RNA associated BRWD3 0.047 bromodomain and WD repeat domain containing 3 [Homo... ZRSR2 0.043 U2 small nuclear RNA auxiliary factor 1-like 2 LOC100129053 0.038 PREDICTED: hypothetical protein LOC100129053 0.038 PREDICTED: hypothetical protein LOC100129053 0.038 PREDICTED: hypothetical protein MESP2 0.038 mesoderm posterior 2 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.