LOC100129053 8335

Name: LOC100129053	Sequence: fasta or formatted (638aa)		NCBI GI: 169203160
Description: PREDICTED: hypothetical protein		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt mRNA [638aa] PREDICTED: hypothetical protein alt mRNA [638aa] PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 49 2 C cysteine 2.4 15 3 D aspartate 4.2 27 2 E glutamate 5.3 34 2 F phenylalanine 3.8 24 1 G glycine 8.3 53 3 H histidine 3.1 20 1 I isoleucine 3.4 22 1 K lysine 4.5 29 4 L leucine 7.8 50 2 M methionine 2.7 17 1 N asparagine 3.3 21 1 P proline 8.6 55 2 Q glutamine 4.1 26 2 R arginine 6.4 41 2 S serine 6.7 43 2 T threonine 6.3 40 2 V valine 5.6 36 2 W tryptophan 2.2 14 1 Y tyrosine 3.4 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100129053 1.000 PREDICTED: hypothetical protein LOC100129053 1.000 PREDICTED: hypothetical protein LOC390245 0.630 PREDICTED: hypothetical protein LOC390245 0.629 PREDICTED: hypothetical protein LOC390245 0.629 PREDICTED: hypothetical protein KDM4D 0.518 jumonji domain containing 2D KDM4B 0.398 jumonji domain containing 2B KDM4C 0.368 jumonji domain containing 2C isoform 3 KDM4C 0.368 jumonji domain containing 2C isoform 4 KDM4C 0.368 jumonji domain containing 2C isoform 2 KDM4C 0.368 jumonji domain containing 2C isoform 1 KDM4A 0.362 jumonji domain containing 2A KDM5A 0.094 retinoblastoma binding protein 2 isoform 1 KDM5A 0.094 retinoblastoma binding protein 2 isoform 2 KDM5D 0.086 jumonji, AT rich interactive domain 1D isoform 1 [H... KDM5C 0.085 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.085 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.085 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.085 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.081 jumonji, AT rich interactive domain 1B LOC100133760 0.081 PREDICTED: similar to Jumonji, AT rich interactive ... JARID2 0.048 jumonji, AT rich interactive domain 2 protein SRCAP 0.011 Snf2-related CBP activator protein ANKRD33B 0.011 PREDICTED: ankyrin repeat domain 33B ARHGEF5 0.011 rho guanine nucleotide exchange factor 5 NFATC2IP 0.009 nuclear factor of activated T-cells, cytoplasmic, ca... ZNF579 0.009 zinc finger protein 579 PRR12 0.009 proline rich 12 WNK1 0.008 WNK lysine deficient protein kinase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.