Guide to the Human Genome
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Name: ZHX1 Sequence: fasta or formatted (873aa) NCBI GI: 63079680
Description:

zinc fingers and homeoboxes 1

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt mRNA [873aa] zinc fingers and homeoboxes 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         50           2
 C cysteine            0.9          8           1
 D aspartate           4.8         42           2
 E glutamate           9.5         83           3
 F phenylalanine       2.9         25           1
 G glycine             4.5         39           2
 H histidine           2.1         18           2
 I isoleucine          4.9         43           3
 K lysine              7.8         68           3
 L leucine             6.9         60           3
 M methionine          1.5         13           2
 N asparagine          6.1         53           2
 P proline             5.8         51           2
 Q glutamine           4.7         41           2
 R arginine            4.7         41           2
 S serine              9.6         84           3
 T threonine           7.9         69           2
 V valine              6.1         53           2
 W tryptophan          1.4         12           1
 Y tyrosine            2.3         20           4
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc fingers and homeoboxes 1 
ZHX1                  1.000   zinc fingers and homeoboxes 1 
ZHX2                  0.309   zinc fingers and homeoboxes 2 
ZHX3                  0.277   zinc fingers and homeoboxes 3 
HOMEZ                 0.049   homeodomain leucine zipper protein 
ZFHX3                 0.022   AT-binding transcription factor 1 
ZFHX4                 0.015   zinc finger homeodomain 4 
ZNF462                0.013   zinc finger protein 462 
LHX5                  0.012   LIM homeobox protein 5 
MUC17                 0.012   mucin 17 
DUXA                  0.012   double homeobox A 
MUC3A                 0.009   PREDICTED: mucin 3A, cell surface associated, parti...
TRPS1                 0.009   zinc finger transcription factor TRPS1 
PITX2                 0.009   paired-like homeodomain transcription factor 2 isofo...
POU2F1                0.009   POU class 2 homeobox 1 
PAX3                  0.009   paired box 3 isoform PAX3g 
PAX3                  0.009   paired box 3 isoform PAX3h 
PAX3                  0.009   paired box 3 isoform PAX3e 
PAX3                  0.009   paired box 3 isoform PAX3d 
PAX3                  0.009   paired box 3 isoform PAX3 
MUC3A                 0.009   PREDICTED: mucin 3A, intestinal 
LHX1                  0.009   LIM homeobox protein 1 
SIX4                  0.009   sine oculis homeobox homolog 4 
LARP1B                0.009   La ribonucleoprotein domain family member 2 isoform ...
LARP1B                0.009   La ribonucleoprotein domain family member 2 isoform ...
LARP1B                0.009   La ribonucleoprotein domain family member 2 isoform ...
NKX1-1                0.009   PREDICTED: NK1 homeobox 1 
NKX1-1                0.009   PREDICTED: NK1 homeobox 1 
NKX1-1                0.009   PREDICTED: HPX-153 homeobox 
SUPT5H                0.009   suppressor of Ty 5 homolog isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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