LARP1B 25131

Name: LARP1B	Sequence: fasta or formatted (522aa)		NCBI GI: 30061565
Description: La ribonucleoprotein domain family member 2 isoform 2		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [914aa] La ribonucleoprotein domain family member 2 isoform 1 alt prot [358aa] La ribonucleoprotein domain family member 2 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 15 1 C cysteine 0.8 4 1 D aspartate 6.7 35 2 E glutamate 10.2 53 2 F phenylalanine 3.1 16 2 G glycine 6.5 34 2 H histidine 1.9 10 1 I isoleucine 4.2 22 1 K lysine 6.7 35 2 L leucine 6.9 36 2 M methionine 1.5 8 2 N asparagine 5.7 30 2 P proline 6.7 35 3 Q glutamine 5.2 27 1 R arginine 7.7 40 2 S serine 9.2 48 2 T threonine 4.8 25 2 V valine 5.2 27 2 W tryptophan 1.3 7 1 Y tyrosine 2.9 15 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.975 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.628 La ribonucleoprotein domain family member 2 isoform ... LARP1 0.468 la related protein isoform 2 LARP1 0.468 la related protein isoform 1 LOC644578 0.126 PREDICTED: similar to hCG2040199 LOC644578 0.126 PREDICTED: similar to hCG2040199 LOC644578 0.126 PREDICTED: similar to hCG2040199 LARP4 0.042 c-Mpl binding protein isoform a LARP4 0.042 c-Mpl binding protein isoform c LARP4 0.042 c-Mpl binding protein isoform b SSB 0.033 autoantigen La THRAP3 0.027 thyroid hormone receptor associated protein 3 [Homo... LARP4B 0.027 La ribonucleoprotein domain family, member 4B LARP6 0.027 La ribonucleoprotein domain family, member 6 isoform... LOC100286959 0.024 PREDICTED: hypothetical protein XP_002343921 LARP7 0.023 La ribonucleoprotein domain family, member 7 LARP7 0.023 La ribonucleoprotein domain family, member 7 TRAF3IP1 0.021 TNF receptor-associated factor 3 interacting protei... TRAF3IP1 0.021 TNF receptor-associated factor 3 interacting protein... LOC100129492 0.019 PREDICTED: similar to small nuclear ribonucleoprote... SNRPD1 0.019 small nuclear ribonucleoprotein D1 polypeptide 16kDa ... MBD2 0.019 methyl-CpG binding domain protein 2 testis-specific i... MBD2 0.019 methyl-CpG binding domain protein 2 isoform 1 SNRNP70 0.018 U1 small nuclear ribonucleoprotein 70 kDa FLJ37078 0.018 hypothetical protein LOC222183 RSRC1 0.017 arginine/serine-rich coiled-coil 1 ZRANB2 0.017 zinc finger protein 265 isoform 2 CIR1 0.017 CBF1 interacting corepressor RBM25 0.016 RNA binding motif protein 25 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.